UP000076842
Proteome Details
| Accession | UP000076842  |
|---|---|
| Description | The genome of Calocera cornea was sequenced as a part of multi genomic saprotrophic fungus sequencing project focused on understanding the diversity in decaying mechanisms, phylogenetic relationships and developmental evolution. Gene content analysis was characteristic of brown-rot fungi. Brown-rot fungi degrade cellulose and hemicellulose components of wood leaving the recalcitrant lignin fraction behind, while White-rot fungi degrade all components of plant cell wall including lignin. This genome was predicted to code for one of the lowest numbers of lignocellulose decomposing carbohydrate-active enzymes (CAZys). It also lacks Auxiliary Activity Family 2 (lignin degradation), the hallmark gene family of white-rot species as well as AA9 LPMOs (lytic polysaccharide monooxygenases). |
| Scientific Name | Calocera cornea HHB12733 |
| Strain | HHB12733 |
| Synonyms | |
| Taxonomy ID | 1353952  |
| Lineage | >Fungi>Basidiomycota>Agaricomycotina>Dacrymycetes>Dacrymycetales>Dacrymycetaceae>Calocera |
| # Genes | 13,076 |
| # Proteins | 13,078 |
Summary & Statistics
Predicted NoLS
Protein Length
WOLFPSORT Prediction