Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

W1QH13

Protein Details
Accession W1QH13    Localization Confidence Medium Confidence Score 12.7
NoLS Segment(s)
PositionSequenceProtein Nature
81-116EQNRGPNRQRPMQKRQQRNGRDRDPRDRRNGNQRTKBasic
NLS Segment(s)
PositionSequence
86-116PNRQRPMQKRQQRNGRDRDPRDRRNGNQRTK
Subcellular Location(s) nucl 18.5, cyto_nucl 12, cyto 4.5, mito 2, plas 2
Family & Domain DBs
InterPro View protein in InterPro  
IPR034101  Lsm4  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0120114  C:Sm-like protein family complex  
GO:0005681  C:spliceosomal complex  
GO:0003723  F:RNA binding  
GO:0000398  P:mRNA splicing, via spliceosome  
GO:0000956  P:nuclear-transcribed mRNA catabolic process  
KEGG opa:HPODL_00774  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01723  LSm4  
Amino Acid Sequences MLPLYLLTSVKTQPILVELKSGETVNGLLENCDSWMNLTLNDAVTVDLHGKRFEKVPEVYVRGNQIKYVRMSNDIIDKFKEQNRGPNRQRPMQKRQQRNGRDRDPRDRRNGNQRTK
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.18
2 0.19
3 0.17
4 0.19
5 0.17
6 0.18
7 0.19
8 0.19
9 0.15
10 0.12
11 0.12
12 0.09
13 0.11
14 0.09
15 0.08
16 0.08
17 0.09
18 0.09
19 0.09
20 0.08
21 0.07
22 0.11
23 0.11
24 0.11
25 0.12
26 0.12
27 0.11
28 0.12
29 0.11
30 0.07
31 0.07
32 0.07
33 0.08
34 0.09
35 0.09
36 0.11
37 0.11
38 0.12
39 0.14
40 0.15
41 0.17
42 0.17
43 0.2
44 0.22
45 0.25
46 0.25
47 0.24
48 0.27
49 0.25
50 0.25
51 0.23
52 0.21
53 0.21
54 0.22
55 0.23
56 0.2
57 0.2
58 0.21
59 0.21
60 0.26
61 0.25
62 0.25
63 0.24
64 0.25
65 0.25
66 0.28
67 0.35
68 0.29
69 0.37
70 0.43
71 0.52
72 0.57
73 0.62
74 0.65
75 0.65
76 0.74
77 0.73
78 0.75
79 0.76
80 0.78
81 0.8
82 0.84
83 0.87
84 0.87
85 0.88
86 0.88
87 0.88
88 0.89
89 0.86
90 0.87
91 0.87
92 0.86
93 0.86
94 0.85
95 0.83
96 0.84