Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

F8PKX6

Protein Details
Accession F8PKX6    Localization Confidence Medium Confidence Score 11.3
NoLS Segment(s)
PositionSequenceProtein Nature
82-102DDAPKPKGRKKDDARGRGRGRBasic
NLS Segment(s)
PositionSequence
85-121PKPKGRKKDDARGRGRGRGVVERARGRGRGRGRGRGF
Subcellular Location(s) nucl 14, cyto_nucl 12.833, cyto 9.5, cyto_pero 5.666
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKTVKMTTRNRDPTSLDSLSIRGNNIRYFVLPDALPLDTLLVDDAPKPKGRKKDDARGRGRGRGVVERARGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.25
3 0.19
4 0.17
5 0.15
6 0.13
7 0.14
8 0.13
9 0.13
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.07
20 0.06
21 0.06
22 0.1
23 0.12
24 0.12
25 0.13
26 0.14
27 0.14
28 0.16
29 0.19
30 0.21
31 0.28
32 0.32
33 0.37
34 0.46
35 0.55
36 0.54
37 0.54
38 0.5
39 0.45
40 0.47
41 0.41
42 0.31
43 0.23
44 0.23
45 0.21
46 0.19
47 0.16
48 0.1
49 0.11
50 0.11
51 0.12
52 0.12
53 0.11
54 0.12
55 0.13
56 0.13
57 0.11
58 0.1
59 0.11
60 0.1
61 0.1
62 0.07
63 0.07
64 0.05
65 0.06
66 0.05
67 0.04
68 0.04
69 0.06
70 0.08
71 0.1
72 0.15
73 0.19
74 0.24
75 0.34
76 0.41
77 0.5
78 0.56
79 0.65
80 0.71
81 0.78
82 0.8
83 0.81
84 0.79
85 0.74
86 0.68
87 0.61
88 0.55
89 0.52
90 0.51
91 0.48
92 0.51
93 0.49
94 0.52
95 0.53
96 0.54
97 0.49
98 0.51
99 0.52
100 0.55
101 0.57