Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

Q8SSM1

Protein Details
Accession Q8SSM1    Localization Confidence Medium Confidence Score 13.3
NoLS Segment(s)
PositionSequenceProtein Nature
1-21MKLVRVLRKCKNERVKIETKEHydrophilic
NLS Segment(s)
PositionSequence
81-97RNRARGQETGKAKRRKT
Subcellular Location(s) nucl 18.5, cyto_nucl 11.5, mito 5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006396  P:RNA processing  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
Amino Acid Sequences MKLVRVLRKCKNERVKIETKEGRRIEGKIVSVDKTMNVEMVDVVVDGAPASTYTVRGSSIRYVLFRDDIDFKPLLVDDRPRNRARGQETGKAKRRKTGV
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.81
2 0.81
3 0.75
4 0.79
5 0.76
6 0.71
7 0.71
8 0.63
9 0.59
10 0.52
11 0.49
12 0.43
13 0.39
14 0.36
15 0.3
16 0.31
17 0.27
18 0.25
19 0.24
20 0.2
21 0.18
22 0.16
23 0.12
24 0.1
25 0.09
26 0.08
27 0.07
28 0.07
29 0.04
30 0.04
31 0.03
32 0.03
33 0.03
34 0.03
35 0.02
36 0.02
37 0.03
38 0.03
39 0.04
40 0.05
41 0.05
42 0.07
43 0.07
44 0.09
45 0.1
46 0.13
47 0.14
48 0.14
49 0.15
50 0.16
51 0.17
52 0.16
53 0.16
54 0.18
55 0.18
56 0.21
57 0.2
58 0.18
59 0.17
60 0.17
61 0.17
62 0.15
63 0.21
64 0.26
65 0.35
66 0.43
67 0.44
68 0.48
69 0.49
70 0.55
71 0.54
72 0.56
73 0.53
74 0.54
75 0.62
76 0.69
77 0.76
78 0.77
79 0.73