Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A5E3XLB9

Protein Details
Accession A0A5E3XLB9    Localization Confidence Medium Confidence Score 12.2
NoLS Segment(s)
PositionSequenceProtein Nature
74-96VDDAPKPKNKKKDDARGRGRGGRBasic
NLS Segment(s)
PositionSequence
78-114PKPKNKKKDDARGRGRGGRGGDRGRGRGRGRGRGRGF
Subcellular Location(s) nucl 18.5, cyto_nucl 13.333, cyto 7, cyto_mito 4.833
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKAVKMTMRNRDPTSLDSLSIRGNNIRYFVLPDALPLDTLLVDDAPKPKNKKKDDARGRGRGGRGGDRGRGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.15
2 0.14
3 0.11
4 0.1
5 0.11
6 0.11
7 0.11
8 0.09
9 0.1
10 0.09
11 0.08
12 0.08
13 0.07
14 0.06
15 0.11
16 0.13
17 0.12
18 0.14
19 0.15
20 0.15
21 0.16
22 0.18
23 0.19
24 0.24
25 0.29
26 0.36
27 0.4
28 0.45
29 0.46
30 0.47
31 0.42
32 0.37
33 0.39
34 0.31
35 0.26
36 0.21
37 0.21
38 0.19
39 0.18
40 0.16
41 0.11
42 0.12
43 0.12
44 0.13
45 0.12
46 0.11
47 0.12
48 0.12
49 0.12
50 0.1
51 0.1
52 0.1
53 0.1
54 0.09
55 0.07
56 0.07
57 0.05
58 0.05
59 0.05
60 0.04
61 0.04
62 0.06
63 0.1
64 0.13
65 0.19
66 0.25
67 0.32
68 0.42
69 0.48
70 0.57
71 0.63
72 0.72
73 0.77
74 0.82
75 0.84
76 0.84
77 0.83
78 0.79
79 0.71
80 0.64
81 0.58
82 0.53
83 0.51
84 0.46
85 0.48
86 0.47
87 0.51
88 0.51
89 0.55
90 0.51
91 0.52
92 0.56
93 0.59
94 0.62