Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

Q8SR04

Protein Details
Accession Q8SR04    Localization Confidence Medium Confidence Score 12.2
NoLS Segment(s)
PositionSequenceProtein Nature
66-88LGTTRGKNKGRKKRQGCEFSRKLBasic
NLS Segment(s)
PositionSequence
70-79RGKNKGRKKR
Subcellular Location(s) nucl 16.5, cyto_nucl 13.5, cyto 9.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR010920  LSM_dom_sf  
IPR027248  Sm_D2  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005829  C:cytosol  
GO:0030532  C:small nuclear ribonucleoprotein complex  
GO:0006397  P:mRNA processing  
GO:0008380  P:RNA splicing  
KEGG ecu:ECU10_1580  -  
Pfam View protein in Pfam  
PF01423  LSM  
Amino Acid Sequences MFLPNNLDDPNEKETMEMKGPLSLVRRAMVKMKPVLVSLRSNRKVLGRVVAYDRHYNLLMEDAKELGTTRGKNKGRKKRQGCEFSRKLGKVFIRGDTVILVAGEIEVDQVEKDGLEDGKGEDASLPGEVAAGDEI
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.22
2 0.25
3 0.25
4 0.23
5 0.19
6 0.19
7 0.2
8 0.22
9 0.24
10 0.22
11 0.21
12 0.21
13 0.22
14 0.22
15 0.27
16 0.27
17 0.3
18 0.3
19 0.32
20 0.31
21 0.3
22 0.32
23 0.29
24 0.33
25 0.34
26 0.41
27 0.41
28 0.4
29 0.4
30 0.4
31 0.41
32 0.35
33 0.35
34 0.25
35 0.25
36 0.27
37 0.3
38 0.3
39 0.29
40 0.28
41 0.23
42 0.22
43 0.2
44 0.17
45 0.17
46 0.15
47 0.13
48 0.12
49 0.1
50 0.1
51 0.1
52 0.1
53 0.07
54 0.1
55 0.11
56 0.13
57 0.22
58 0.27
59 0.36
60 0.46
61 0.56
62 0.63
63 0.73
64 0.79
65 0.79
66 0.84
67 0.86
68 0.83
69 0.83
70 0.76
71 0.73
72 0.72
73 0.63
74 0.54
75 0.5
76 0.45
77 0.42
78 0.4
79 0.35
80 0.3
81 0.29
82 0.29
83 0.23
84 0.21
85 0.14
86 0.11
87 0.08
88 0.05
89 0.04
90 0.04
91 0.03
92 0.03
93 0.03
94 0.03
95 0.03
96 0.04
97 0.04
98 0.04
99 0.04
100 0.07
101 0.07
102 0.07
103 0.08
104 0.09
105 0.12
106 0.12
107 0.12
108 0.1
109 0.1
110 0.11
111 0.1
112 0.09
113 0.06
114 0.06
115 0.06