Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A5B1QS22

Protein Details
Accession A0A5B1QS22    Localization Confidence Medium Confidence Score 14.2
NoLS Segment(s)
PositionSequenceProtein Nature
81-104VDDAPKPKNRKKDDSRGRGRGRGGBasic
NLS Segment(s)
PositionSequence
85-122PKPKNRKKDDSRGRGRGRGGGDRGRGGRGRGRGRGRGF
Subcellular Location(s) nucl 17, cyto 6.5, cyto_pero 4
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKTVKMSTRNRDPTSLDSLSIRGNNIRYFVLPDSLPLDTLLVDDAPKPKNRKKDDSRGRGRGRGGGDRGRGGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.25
3 0.19
4 0.17
5 0.15
6 0.13
7 0.14
8 0.13
9 0.13
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.07
20 0.06
21 0.06
22 0.1
23 0.12
24 0.12
25 0.13
26 0.14
27 0.14
28 0.16
29 0.19
30 0.21
31 0.28
32 0.32
33 0.37
34 0.47
35 0.55
36 0.55
37 0.54
38 0.5
39 0.45
40 0.47
41 0.41
42 0.31
43 0.23
44 0.23
45 0.21
46 0.19
47 0.16
48 0.1
49 0.11
50 0.11
51 0.12
52 0.12
53 0.11
54 0.13
55 0.13
56 0.13
57 0.11
58 0.11
59 0.12
60 0.12
61 0.12
62 0.09
63 0.09
64 0.07
65 0.07
66 0.07
67 0.05
68 0.05
69 0.06
70 0.1
71 0.14
72 0.2
73 0.27
74 0.32
75 0.42
76 0.5
77 0.59
78 0.64
79 0.72
80 0.78
81 0.82
82 0.87
83 0.87
84 0.85
85 0.81
86 0.73
87 0.68
88 0.62
89 0.59
90 0.54
91 0.51
92 0.48
93 0.48
94 0.47
95 0.47
96 0.44
97 0.4
98 0.4
99 0.43
100 0.47
101 0.5
102 0.56