Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

G4TGD0

Protein Details
Accession G4TGD0    Localization Confidence Medium Confidence Score 11.8
NoLS Segment(s)
PositionSequenceProtein Nature
81-102VDDAPKPKSKKKEEAARGRGARBasic
NLS Segment(s)
PositionSequence
85-123PKPKSKKKEEAARGRGARGRGGRGGDRGRGRGRGRGRGI
Subcellular Location(s) nucl 14, cyto_mito 6.833, mito 6.5, cyto 6, cyto_pero 3.833
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLNNETVTIELKNGSIVHGTITGVDMQMNTHLKTVRLTARNRDPQPLDSLSIRGNNIRYFILPDALPLDTLLVDDAPKPKSKKKEEAARGRGARGRGGRGGDRGRGRGRGRGRGI
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.25
3 0.19
4 0.17
5 0.15
6 0.13
7 0.14
8 0.13
9 0.13
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.07
20 0.06
21 0.06
22 0.1
23 0.12
24 0.12
25 0.14
26 0.14
27 0.15
28 0.16
29 0.2
30 0.22
31 0.27
32 0.29
33 0.35
34 0.44
35 0.52
36 0.53
37 0.54
38 0.49
39 0.44
40 0.46
41 0.4
42 0.32
43 0.24
44 0.24
45 0.19
46 0.19
47 0.18
48 0.15
49 0.15
50 0.13
51 0.14
52 0.13
53 0.12
54 0.12
55 0.12
56 0.12
57 0.1
58 0.1
59 0.1
60 0.1
61 0.1
62 0.07
63 0.07
64 0.05
65 0.06
66 0.05
67 0.04
68 0.04
69 0.06
70 0.09
71 0.11
72 0.17
73 0.2
74 0.27
75 0.37
76 0.45
77 0.53
78 0.6
79 0.69
80 0.74
81 0.81
82 0.81
83 0.81
84 0.75
85 0.7
86 0.64
87 0.55
88 0.51
89 0.44
90 0.42
91 0.36
92 0.38
93 0.37
94 0.41
95 0.44
96 0.45
97 0.46
98 0.48
99 0.48
100 0.53
101 0.52
102 0.54
103 0.57