Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A5C3QMR6

Protein Details
Accession A0A5C3QMR6    Localization Confidence Medium Confidence Score 11.3
NoLS Segment(s)
PositionSequenceProtein Nature
81-103VDDAPKPKSRKKDDVRGRGRGRGBasic
NLS Segment(s)
PositionSequence
85-121PKPKSRKKDDVRGRGRGRGGMDRGGRARGRGRGRGRG
Subcellular Location(s) nucl 14, cyto_nucl 12.833, cyto 9.5, cyto_pero 5.666
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLNNETVSIELKNGSVVHGTITGVDMQMNTHLKTVKMTARNRDPTSLDSLSIRGNTIRYFVLPDALPLDTLLVDDAPKPKSRKKDDVRGRGRGRGGMDRGGRARGRGRGRGRG
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.25
3 0.19
4 0.17
5 0.15
6 0.13
7 0.14
8 0.13
9 0.13
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.07
20 0.06
21 0.06
22 0.1
23 0.12
24 0.12
25 0.13
26 0.14
27 0.14
28 0.16
29 0.19
30 0.21
31 0.27
32 0.31
33 0.37
34 0.45
35 0.52
36 0.52
37 0.51
38 0.47
39 0.41
40 0.43
41 0.36
42 0.28
43 0.2
44 0.2
45 0.18
46 0.16
47 0.14
48 0.08
49 0.09
50 0.08
51 0.09
52 0.08
53 0.08
54 0.1
55 0.09
56 0.11
57 0.1
58 0.1
59 0.1
60 0.1
61 0.1
62 0.08
63 0.08
64 0.05
65 0.06
66 0.05
67 0.04
68 0.04
69 0.06
70 0.09
71 0.11
72 0.17
73 0.21
74 0.27
75 0.37
76 0.45
77 0.55
78 0.6
79 0.69
80 0.74
81 0.82
82 0.84
83 0.85
84 0.81
85 0.76
86 0.7
87 0.63
88 0.57
89 0.53
90 0.48
91 0.45
92 0.44
93 0.43
94 0.43
95 0.45
96 0.42
97 0.38
98 0.41
99 0.42
100 0.47
101 0.51