Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A4P6XNH4

Protein Details
Accession A0A4P6XNH4    Localization Confidence Medium Confidence Score 10.3
NoLS Segment(s)
PositionSequenceProtein Nature
87-106KPGDKPRPPVRGPPPKKPRYBasic
NLS Segment(s)
PositionSequence
89-106GDKPRPPVRGPPPKKPRY
Subcellular Location(s) nucl 12, cyto_nucl 11.666, cyto 9, cyto_mito 7.999, mito 5.5, cyto_pero 5.499
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
IPR034099  SmD3  
Gene Ontology GO:0005829  C:cytosol  
GO:0120114  C:Sm-like protein family complex  
GO:0005681  C:spliceosomal complex  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01721  Sm_D3  
Amino Acid Sequences MSAGIPVRLLNEAQGHVVSLELTTGDTYRGKLIENEDNMNLSLTDVTRTKGLTGETSYMSQVFVRGSMIRFVSVPDILRNAPMFLMKPGDKPRPPVRGPPPKKPRY
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.15
2 0.14
3 0.12
4 0.12
5 0.09
6 0.06
7 0.06
8 0.04
9 0.05
10 0.05
11 0.05
12 0.07
13 0.08
14 0.09
15 0.1
16 0.11
17 0.11
18 0.13
19 0.17
20 0.22
21 0.23
22 0.25
23 0.24
24 0.24
25 0.23
26 0.21
27 0.17
28 0.1
29 0.08
30 0.06
31 0.08
32 0.08
33 0.08
34 0.09
35 0.09
36 0.09
37 0.1
38 0.1
39 0.1
40 0.1
41 0.11
42 0.12
43 0.12
44 0.12
45 0.11
46 0.1
47 0.09
48 0.08
49 0.07
50 0.06
51 0.07
52 0.07
53 0.08
54 0.1
55 0.11
56 0.1
57 0.1
58 0.11
59 0.12
60 0.12
61 0.12
62 0.11
63 0.13
64 0.13
65 0.15
66 0.15
67 0.13
68 0.12
69 0.13
70 0.13
71 0.12
72 0.17
73 0.17
74 0.23
75 0.3
76 0.39
77 0.4
78 0.47
79 0.55
80 0.58
81 0.61
82 0.64
83 0.68
84 0.7
85 0.75
86 0.78