Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A409W6D0

Protein Details
Accession A0A409W6D0    Localization Confidence Medium Confidence Score 13.9
NoLS Segment(s)
PositionSequenceProtein Nature
82-102DDAPKPKGRKKDDARGRGRGRBasic
NLS Segment(s)
PositionSequence
85-121PKPKGRKKDDARGRGRGRGGDRGRPRGRGGRGRGRGF
Subcellular Location(s) nucl 16, mito 7, cyto 4
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLNNETVSIELKNGSVVHGTITGVDMQMNTYLKTVKLTTRNRDPLSLDSLSIRGNNIRYFILPDALPLDTLLVDDAPKPKGRKKDDARGRGRGRGGDRGRPRGRGGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.25
3 0.19
4 0.17
5 0.15
6 0.13
7 0.14
8 0.13
9 0.13
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.07
20 0.06
21 0.06
22 0.09
23 0.09
24 0.09
25 0.09
26 0.1
27 0.1
28 0.12
29 0.13
30 0.16
31 0.25
32 0.31
33 0.37
34 0.46
35 0.54
36 0.53
37 0.53
38 0.5
39 0.43
40 0.42
41 0.35
42 0.26
43 0.19
44 0.18
45 0.17
46 0.15
47 0.13
48 0.09
49 0.1
50 0.1
51 0.11
52 0.11
53 0.1
54 0.12
55 0.13
56 0.13
57 0.11
58 0.1
59 0.11
60 0.1
61 0.1
62 0.07
63 0.07
64 0.05
65 0.06
66 0.05
67 0.04
68 0.04
69 0.06
70 0.08
71 0.1
72 0.15
73 0.19
74 0.24
75 0.34
76 0.41
77 0.5
78 0.56
79 0.65
80 0.71
81 0.78
82 0.8
83 0.81
84 0.79
85 0.74
86 0.69
87 0.65
88 0.58
89 0.58
90 0.56
91 0.56
92 0.59
93 0.63
94 0.65
95 0.63
96 0.64
97 0.63
98 0.67
99 0.67
100 0.68
101 0.68