Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A409W3V6

Protein Details
Accession A0A409W3V6    Localization Confidence Medium Confidence Score 10.6
NoLS Segment(s)
PositionSequenceProtein Nature
72-92MWTETPKGKNKKPVNKDRFISHydrophilic
NLS Segment(s)
Subcellular Location(s) nucl 22.5, cyto_nucl 14.5, cyto 3.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR027248  Sm_D2  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005829  C:cytosol  
GO:0030532  C:small nuclear ribonucleoprotein complex  
GO:0006397  P:mRNA processing  
GO:0008380  P:RNA splicing  
GO:0006364  P:rRNA processing  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01720  Sm_D2  
Amino Acid Sequences QYVHVPKSELDEAQLRQLEEHEISQGPLSVLQQAVRNHAQVLISLRNNKKLLARVKAFDRHSNMVLENVKEMWTETPKGKNKKPVNKDRFISKMFLRGDSVILILRNQA
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.34
2 0.27
3 0.24
4 0.25
5 0.25
6 0.21
7 0.2
8 0.16
9 0.14
10 0.14
11 0.14
12 0.14
13 0.11
14 0.1
15 0.1
16 0.09
17 0.09
18 0.1
19 0.15
20 0.15
21 0.2
22 0.21
23 0.21
24 0.19
25 0.2
26 0.19
27 0.15
28 0.18
29 0.17
30 0.18
31 0.25
32 0.26
33 0.31
34 0.32
35 0.31
36 0.31
37 0.33
38 0.36
39 0.36
40 0.37
41 0.33
42 0.37
43 0.43
44 0.42
45 0.4
46 0.39
47 0.35
48 0.34
49 0.33
50 0.28
51 0.26
52 0.25
53 0.21
54 0.17
55 0.14
56 0.13
57 0.12
58 0.13
59 0.11
60 0.12
61 0.14
62 0.17
63 0.26
64 0.34
65 0.42
66 0.47
67 0.55
68 0.62
69 0.7
70 0.78
71 0.8
72 0.81
73 0.81
74 0.8
75 0.77
76 0.74
77 0.66
78 0.6
79 0.51
80 0.5
81 0.43
82 0.42
83 0.36
84 0.3
85 0.29
86 0.24
87 0.23
88 0.17
89 0.16