Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A409YG28

Protein Details
Accession A0A409YG28    Localization Confidence Medium Confidence Score 10.8
NoLS Segment(s)
PositionSequenceProtein Nature
76-95DAPKPKGRKKEDIRGRGRGRBasic
NLS Segment(s)
PositionSequence
78-114PKPKGRKKEDIRGRGRGRGVDRGRGRGRGGRGRGRGI
Subcellular Location(s) nucl 14.5, cyto_nucl 13.166, cyto 10.5, cyto_mito 6.666, cyto_pero 6.166
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKTVKMTTRNRDPVSLDTLSIRGNNIRYFILPDALPLDTLLVDDAPKPKGRKKEDIRGRGRGRGVDRGRGRGRGGRGRGRGI
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.15
2 0.14
3 0.11
4 0.1
5 0.11
6 0.11
7 0.11
8 0.09
9 0.1
10 0.09
11 0.08
12 0.08
13 0.07
14 0.06
15 0.11
16 0.13
17 0.13
18 0.14
19 0.15
20 0.15
21 0.17
22 0.21
23 0.23
24 0.29
25 0.34
26 0.39
27 0.48
28 0.56
29 0.55
30 0.54
31 0.49
32 0.43
33 0.44
34 0.37
35 0.27
36 0.2
37 0.19
38 0.18
39 0.15
40 0.13
41 0.09
42 0.1
43 0.1
44 0.11
45 0.11
46 0.1
47 0.12
48 0.12
49 0.12
50 0.1
51 0.1
52 0.1
53 0.1
54 0.09
55 0.07
56 0.07
57 0.05
58 0.05
59 0.05
60 0.04
61 0.04
62 0.06
63 0.08
64 0.1
65 0.15
66 0.18
67 0.24
68 0.33
69 0.4
70 0.49
71 0.56
72 0.64
73 0.7
74 0.78
75 0.8
76 0.8
77 0.78
78 0.74
79 0.69
80 0.64
81 0.58
82 0.58
83 0.54
84 0.54
85 0.54
86 0.57
87 0.58
88 0.56
89 0.55
90 0.52
91 0.56
92 0.56
93 0.6
94 0.6