Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A4P9YTN4

Protein Details
Accession A0A4P9YTN4    Localization Confidence Medium Confidence Score 11.2
NoLS Segment(s)
PositionSequenceProtein Nature
77-99VDDSPKAKSKKKKEDAVGRGRGRBasic
NLS Segment(s)
PositionSequence
82-116KAKSKKKKEDAVGRGRGRGRGGPRGRGRGRGRGRG
Subcellular Location(s) nucl 12.5, cyto_nucl 12, cyto 10.5, mito 4
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences RFLMKLSNEVVTIELKNGTVVHGTITGVDMSMNTHLKMVKMTVKNRDPVNLDSLSVRGNNIRYFILPDSLPLDTLLVDDSPKAKSKKKKEDAVGRGRGRGRGGPRGRGRGRGRGRG
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.14
2 0.12
3 0.12
4 0.12
5 0.11
6 0.1
7 0.09
8 0.09
9 0.09
10 0.09
11 0.09
12 0.09
13 0.08
14 0.07
15 0.07
16 0.06
17 0.06
18 0.09
19 0.1
20 0.09
21 0.11
22 0.11
23 0.12
24 0.13
25 0.14
26 0.18
27 0.23
28 0.28
29 0.35
30 0.38
31 0.43
32 0.43
33 0.44
34 0.4
35 0.35
36 0.35
37 0.27
38 0.23
39 0.19
40 0.19
41 0.16
42 0.13
43 0.11
44 0.08
45 0.1
46 0.1
47 0.11
48 0.11
49 0.1
50 0.13
51 0.13
52 0.13
53 0.11
54 0.11
55 0.12
56 0.12
57 0.12
58 0.09
59 0.09
60 0.07
61 0.07
62 0.07
63 0.05
64 0.05
65 0.05
66 0.07
67 0.09
68 0.15
69 0.18
70 0.25
71 0.35
72 0.46
73 0.57
74 0.65
75 0.72
76 0.76
77 0.83
78 0.85
79 0.86
80 0.85
81 0.76
82 0.74
83 0.67
84 0.61
85 0.53
86 0.5
87 0.45
88 0.46
89 0.49
90 0.53
91 0.58
92 0.65
93 0.66
94 0.69
95 0.69
96 0.69