A0A4P9ZDX9

UniProt ID: A0A4P9ZDX9   Organism: Metschnikowia bicuspidata
Gene: LSM4   Protein: U6 snRNA-associated Sm-like protein LSm4 (Fragment)
Length: 136 AA

Protein Details

• Accession: A0A4P9ZDX9
• Localization Confidence: Low
• Confidence Score: 7.8
• NoLS Segment(s):

  Position	Sequence	Protein Nature
  87-109	MEQRNRTKGRRGPGNFQKRNNDY	Hydrophilic

• Subcellular Location(s): mito 14, nucl 9, cyto_mito 9
• Family & Domain DBs:
  • InterPro:
    • IPR034101 Lsm4
    • IPR027141 LSm4/Sm_D1/D3
    • IPR010920 LSM_dom_sf
    • IPR047575 Sm
    • IPR001163 Sm_dom_euk/arc
  • Gene Ontology:
    • GO:0120114 C:Sm-like protein family complex
    • GO:0005681 C:spliceosomal complex
    • GO:0003723 F:RNA binding
    • GO:0000398 P:mRNA splicing, via spliceosome
    • GO:0000956 P:nuclear-transcribed mRNA catabolic process
  • Pfam:
    • PF01423 LSM
  • PROSITE:
    • PS52002 SM
  • CDD:
    • cd01723 LSm4
• Amino Acid Sequences: QLPLYMLTSIKKQKILVELKNGETIFGKLNNCDSWMNLTLSDAIYNFNNGEKFNKLEEIYVRGNHIKFLRLPDTVMEQAKEQNMLNMEQRNRTKGRRGPGNFQKRNNDYGR

NoLS Predictions per Residue - Data Table

Residue Number, Score
1, 0.44
2, 0.51
3, 0.49
4, 0.51
5, 0.51
6, 0.5
7, 0.54
8, 0.49
9, 0.4
10, 0.33
11, 0.28
12, 0.21
13, 0.21
14, 0.2
15, 0.16
16, 0.19
17, 0.18
18, 0.2
19, 0.19
20, 0.17
21, 0.18
22, 0.19
23, 0.19
24, 0.16
25, 0.16
26, 0.14
27, 0.14
28, 0.14
29, 0.09
30, 0.08
31, 0.07
32, 0.08
33, 0.08
34, 0.08
35, 0.09
36, 0.09
37, 0.11
38, 0.11
39, 0.13
40, 0.13
41, 0.15
42, 0.14
43, 0.14
44, 0.14
45, 0.17
46, 0.17
47, 0.16
48, 0.18
49, 0.19
50, 0.18
51, 0.2
52, 0.2
53, 0.18
54, 0.17
55, 0.22
56, 0.23
57, 0.2
58, 0.21
59, 0.19
60, 0.23
61, 0.24
62, 0.24
63, 0.19
64, 0.17
65, 0.19
66, 0.19
67, 0.2
68, 0.15
69, 0.15
70, 0.15
71, 0.16
72, 0.2
73, 0.24
74, 0.26
75, 0.32
76, 0.35
77, 0.39
78, 0.43
79, 0.46
80, 0.51
81, 0.51
82, 0.58
83, 0.61
84, 0.64
85, 0.68
86, 0.74
87, 0.8
88, 0.79
89, 0.81
90, 0.82
91, 0.75