Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A397JX48

Protein Details
Accession A0A397JX48    Localization Confidence Medium Confidence Score 12.2
NoLS Segment(s)
PositionSequenceProtein Nature
75-96TETPKAGKGKKSKPVNKDRFISHydrophilic
NLS Segment(s)
PositionSequence
80-88AGKGKKSKP
Subcellular Location(s) nucl 18.5, cyto_nucl 14.333, cyto 7, cyto_pero 4.499
Family & Domain DBs
InterPro View protein in InterPro  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR027248  Sm_D2  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005829  C:cytosol  
GO:0030532  C:small nuclear ribonucleoprotein complex  
GO:0006397  P:mRNA processing  
GO:0008380  P:RNA splicing  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01720  Sm_D2  
Amino Acid Sequences MSTQGKSKAEMTEEELRQLEEHEFNTGPLSVLQQSVKNNTQILINCRNNRKLLARVKAFDRHCNMVLENVKEMWTETPKAGKGKKSKPVNKDRFISKMFLRGDSVILVLRNTV
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.35
2 0.33
3 0.3
4 0.27
5 0.27
6 0.23
7 0.16
8 0.16
9 0.17
10 0.16
11 0.16
12 0.17
13 0.15
14 0.13
15 0.11
16 0.12
17 0.1
18 0.12
19 0.13
20 0.15
21 0.16
22 0.21
23 0.23
24 0.23
25 0.22
26 0.21
27 0.23
28 0.23
29 0.26
30 0.31
31 0.35
32 0.38
33 0.43
34 0.45
35 0.43
36 0.44
37 0.42
38 0.4
39 0.41
40 0.44
41 0.42
42 0.41
43 0.43
44 0.47
45 0.46
46 0.43
47 0.39
48 0.34
49 0.33
50 0.32
51 0.29
52 0.28
53 0.29
54 0.25
55 0.22
56 0.19
57 0.18
58 0.16
59 0.17
60 0.13
61 0.13
62 0.13
63 0.13
64 0.17
65 0.2
66 0.26
67 0.3
68 0.35
69 0.42
70 0.49
71 0.57
72 0.64
73 0.7
74 0.74
75 0.81
76 0.84
77 0.81
78 0.79
79 0.75
80 0.71
81 0.65
82 0.6
83 0.5
84 0.49
85 0.43
86 0.39
87 0.36
88 0.3
89 0.29
90 0.25
91 0.24
92 0.17
93 0.16