Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A397U1L9

Protein Details
Accession A0A397U1L9    Localization Confidence Medium Confidence Score 11.5
NoLS Segment(s)
PositionSequenceProtein Nature
76-95ETPKAGKGKKAKPVNKDRFIBasic
NLS Segment(s)
PositionSequence
79-88KAGKGKKAKP
Subcellular Location(s) nucl 15.5, cyto_nucl 13.833, cyto 9, cyto_pero 5.499
Family & Domain DBs
InterPro View protein in InterPro  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR027248  Sm_D2  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005829  C:cytosol  
GO:0030532  C:small nuclear ribonucleoprotein complex  
GO:0006397  P:mRNA processing  
GO:0008380  P:RNA splicing  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01720  Sm_D2  
Amino Acid Sequences ISTQTKSKAEMTEEELRQLEEHEFNTGPLSVLQQSVKNNTQILINCRNNRKLLARVKAFDRHCNMVLENVKEMWTETPKAGKGKKAKPVNKDRFISKMFLRGDSVILGTFKQVSFYLL
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.4
2 0.36
3 0.33
4 0.3
5 0.27
6 0.24
7 0.17
8 0.17
9 0.17
10 0.16
11 0.16
12 0.17
13 0.16
14 0.13
15 0.11
16 0.12
17 0.1
18 0.12
19 0.13
20 0.15
21 0.17
22 0.22
23 0.24
24 0.23
25 0.23
26 0.21
27 0.24
28 0.23
29 0.27
30 0.31
31 0.35
32 0.39
33 0.44
34 0.46
35 0.44
36 0.44
37 0.42
38 0.41
39 0.42
40 0.45
41 0.43
42 0.42
43 0.44
44 0.48
45 0.46
46 0.43
47 0.39
48 0.34
49 0.33
50 0.32
51 0.28
52 0.27
53 0.28
54 0.24
55 0.21
56 0.18
57 0.17
58 0.16
59 0.16
60 0.13
61 0.12
62 0.12
63 0.13
64 0.16
65 0.19
66 0.25
67 0.27
68 0.32
69 0.38
70 0.44
71 0.53
72 0.6
73 0.64
74 0.68
75 0.77
76 0.8
77 0.79
78 0.76
79 0.7
80 0.66
81 0.62
82 0.56
83 0.47
84 0.45
85 0.38
86 0.36
87 0.35
88 0.29
89 0.28
90 0.24
91 0.23
92 0.16
93 0.15
94 0.13
95 0.12
96 0.13
97 0.12
98 0.13