Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A316UDZ9

Protein Details
Accession A0A316UDZ9    Localization Confidence Medium Confidence Score 10.7
NoLS Segment(s)
PositionSequenceProtein Nature
84-107VDDAPKVKGKRKPREEKARGGRGGBasic
NLS Segment(s)
PositionSequence
89-124KVKGKRKPREEKARGGRGGGMRGRGGPRGRGRGRGF
Subcellular Location(s) nucl 12.5, cyto_nucl 10.166, cyto_mito 6.666, cyto 6.5, mito 5.5, cyto_pero 4.166
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MNLLIDSRFLMKLNNESVTIELKNGSIVHGTVTGVDQQMNTHLKTVKLTMRNREPVSLDTLSIRGNNVRYWILPDSLPLDMLLVDDAPKVKGKRKPREEKARGGRGGGMRGRGGPRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.25
2 0.23
3 0.23
4 0.24
5 0.25
6 0.23
7 0.18
8 0.15
9 0.13
10 0.14
11 0.13
12 0.12
13 0.09
14 0.09
15 0.09
16 0.1
17 0.09
18 0.08
19 0.09
20 0.09
21 0.09
22 0.09
23 0.08
24 0.07
25 0.13
26 0.15
27 0.14
28 0.16
29 0.17
30 0.17
31 0.18
32 0.22
33 0.22
34 0.28
35 0.32
36 0.37
37 0.43
38 0.49
39 0.49
40 0.47
41 0.43
42 0.36
43 0.38
44 0.3
45 0.23
46 0.17
47 0.16
48 0.15
49 0.13
50 0.12
51 0.09
52 0.09
53 0.09
54 0.11
55 0.11
56 0.1
57 0.14
58 0.15
59 0.14
60 0.13
61 0.13
62 0.13
63 0.13
64 0.13
65 0.09
66 0.08
67 0.06
68 0.07
69 0.06
70 0.04
71 0.04
72 0.05
73 0.05
74 0.06
75 0.11
76 0.13
77 0.2
78 0.28
79 0.38
80 0.49
81 0.6
82 0.7
83 0.76
84 0.86
85 0.86
86 0.89
87 0.89
88 0.87
89 0.78
90 0.68
91 0.63
92 0.54
93 0.54
94 0.46
95 0.39
96 0.31
97 0.33
98 0.34
99 0.36
100 0.35
101 0.37
102 0.43
103 0.5
104 0.53