A0A2S4VHZ7

UniProt ID: A0A2S4VHZ7   Organism: Puccinia striiformis
Gene: PSTT_07029   Protein: Small nuclear ribonucleoprotein Sm D2
Length: 129 AA

Protein Details

• Accession: A0A2S4VHZ7
• Localization Confidence: Medium
• Confidence Score: 11.4
• NoLS Segment(s):

  Position	Sequence	Protein Nature
  74-96	MWTELPKGKNKKPVNKDRFISRC	Hydrophilic

• Subcellular Location(s): nucl 24.5, cyto_nucl 13.5
• Family & Domain DBs:
  • InterPro:
    • IPR010920 LSM_dom_sf
    • IPR047575 Sm
    • IPR027248 Sm_D2
    • IPR001163 Sm_dom_euk/arc
  • Gene Ontology:
    • GO:0005829 C:cytosol
    • GO:0030532 C:small nuclear ribonucleoprotein complex
    • GO:0006397 P:mRNA processing
    • GO:0008380 P:RNA splicing
    • GO:0006364 P:rRNA processing
  • Pfam:
    • PF01423 LSM
  • PROSITE:
    • PS52002 SM
  • CDD:
    • cd01720 Sm_D2
• Amino Acid Sequences: MSQYAHVPKSELDEEKIRALEEHEIATGPLSVLQSSVKNHTQILIALRNNRKLLARVKAFDRHSNMVLINVKEMWTELPKGKNKKPVNKDRFISRCSYGEILLS

NoLS Predictions per Residue - Data Table

Residue Number, Score
1, 0.33
2, 0.35
3, 0.35
4, 0.28
5, 0.24
6, 0.23
7, 0.23
8, 0.19
9, 0.17
10, 0.14
11, 0.14
12, 0.13
13, 0.13
14, 0.11
15, 0.07
16, 0.08
17, 0.07
18, 0.06
19, 0.07
20, 0.08
21, 0.1
22, 0.11
23, 0.16
24, 0.17
25, 0.17
26, 0.18
27, 0.18
28, 0.17
29, 0.17
30, 0.19
31, 0.19
32, 0.19
33, 0.25
34, 0.28
35, 0.31
36, 0.3
37, 0.3
38, 0.27
39, 0.26
40, 0.29
41, 0.3
42, 0.3
43, 0.28
44, 0.31
45, 0.37
46, 0.39
47, 0.41
48, 0.41
49, 0.36
50, 0.34
51, 0.33
52, 0.3
53, 0.27
54, 0.28
55, 0.23
56, 0.19
57, 0.16
58, 0.15
59, 0.14
60, 0.14
61, 0.12
62, 0.1
63, 0.13
64, 0.16
65, 0.24
66, 0.32
67, 0.4
68, 0.46
69, 0.54
70, 0.61
71, 0.69
72, 0.75
73, 0.79
74, 0.8
75, 0.81
76, 0.8
77, 0.8
78, 0.78
79, 0.71
80, 0.65
81, 0.58
82, 0.51
83, 0.47
84, 0.44