Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A2J6RIF1

Protein Details
Accession A0A2J6RIF1    Localization Confidence Medium Confidence Score 10.9
NoLS Segment(s)
PositionSequenceProtein Nature
16-36FNSYRNPRYRGLRRTRQTKLEHydrophilic
NLS Segment(s)
Subcellular Location(s) nucl 16, mito 7, cyto 4
Family & Domain DBs
InterPro View protein in InterPro  
IPR044641  Lsm7/SmG-like  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
IPR034098  Sm_G  
Gene Ontology GO:0005681  C:spliceosomal complex  
GO:0003723  F:RNA binding  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01719  Sm_G  
Amino Acid Sequences MPQAQPELKKVRTAFFNSYRNPRYRGLRRTRQTKLELHDGKRPTENKWTDMILQYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGEKVRLGMVVIRGNSVVMLEALERIGGGREDRG
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.5
2 0.51
3 0.57
4 0.56
5 0.64
6 0.66
7 0.63
8 0.61
9 0.59
10 0.6
11 0.62
12 0.67
13 0.68
14 0.71
15 0.76
16 0.81
17 0.82
18 0.79
19 0.75
20 0.71
21 0.65
22 0.66
23 0.64
24 0.58
25 0.58
26 0.53
27 0.49
28 0.5
29 0.46
30 0.39
31 0.41
32 0.41
33 0.36
34 0.36
35 0.35
36 0.3
37 0.3
38 0.27
39 0.18
40 0.17
41 0.16
42 0.17
43 0.16
44 0.14
45 0.13
46 0.14
47 0.13
48 0.11
49 0.18
50 0.18
51 0.24
52 0.26
53 0.26
54 0.24
55 0.23
56 0.25
57 0.19
58 0.18
59 0.14
60 0.12
61 0.14
62 0.14
63 0.15
64 0.13
65 0.12
66 0.09
67 0.07
68 0.07
69 0.05
70 0.04
71 0.04
72 0.04
73 0.04
74 0.04
75 0.04
76 0.05
77 0.05
78 0.05
79 0.07
80 0.08
81 0.09
82 0.09
83 0.09
84 0.1
85 0.12
86 0.12
87 0.1
88 0.12
89 0.15
90 0.18
91 0.18
92 0.18
93 0.16
94 0.16
95 0.15
96 0.13
97 0.09
98 0.05
99 0.06
100 0.05
101 0.06
102 0.06
103 0.06
104 0.05
105 0.05
106 0.07
107 0.08