Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A2C5XSY8

Protein Details
Accession A0A2C5XSY8    Localization Confidence Medium Confidence Score 10.5
NoLS Segment(s)
PositionSequenceProtein Nature
81-103IDDTPKPKNKARKETDRGRGRGRBasic
NLS Segment(s)
PositionSequence
86-118KPKNKARKETDRGRGRGRGGGRGRGRGRGRGRG
Subcellular Location(s) mito 12, nucl 9, cyto_nucl 8.5, cyto 6
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKCSSETVTIELKNGTVVHGTIASVSPQMNVALRSVKMTPKNQDPIALETLNVRGSTIRYIILPDSLPIDTLLIDDTPKPKNKARKETDRGRGRGRGGGRGRGRGRGRGRG
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.28
3 0.25
4 0.25
5 0.22
6 0.19
7 0.18
8 0.17
9 0.14
10 0.1
11 0.1
12 0.09
13 0.09
14 0.09
15 0.08
16 0.08
17 0.08
18 0.08
19 0.08
20 0.07
21 0.08
22 0.08
23 0.09
24 0.09
25 0.09
26 0.11
27 0.11
28 0.12
29 0.13
30 0.18
31 0.23
32 0.27
33 0.3
34 0.34
35 0.39
36 0.38
37 0.4
38 0.37
39 0.34
40 0.34
41 0.29
42 0.22
43 0.18
44 0.19
45 0.16
46 0.13
47 0.1
48 0.06
49 0.07
50 0.08
51 0.08
52 0.07
53 0.07
54 0.08
55 0.08
56 0.09
57 0.08
58 0.08
59 0.09
60 0.08
61 0.09
62 0.08
63 0.08
64 0.06
65 0.06
66 0.07
67 0.05
68 0.06
69 0.07
70 0.1
71 0.16
72 0.21
73 0.25
74 0.31
75 0.41
76 0.51
77 0.6
78 0.66
79 0.72
80 0.76
81 0.82
82 0.86
83 0.86
84 0.82
85 0.78
86 0.75
87 0.67
88 0.64
89 0.57
90 0.56
91 0.51
92 0.55
93 0.54
94 0.57
95 0.57
96 0.6
97 0.61
98 0.61