A0A1Y2VDT0

UniProt ID: A0A1Y2VDT0   Organism: Hypoxylon sp. CO27-5
Gene: M434DRAFT_394364   Protein: Small nuclear ribonucleoprotein Sm D2
Length: 142 AA

Protein Details

• Accession: A0A1Y2VDT0
• Localization Confidence: Low
• Confidence Score: 9.8
• NoLS Segment(s):

  Position	Sequence	Protein Nature
  83-102	TPKLSNGKKGRPVNKDRFIS	Hydrophilic

• Subcellular Location(s): nucl 19, cyto_nucl 14.5, cyto 6
• Family & Domain DBs:
  • InterPro:
    • IPR010920 LSM_dom_sf
    • IPR047575 Sm
    • IPR027248 Sm_D2
    • IPR001163 Sm_dom_euk/arc
  • Gene Ontology:
    • GO:0005829 C:cytosol
    • GO:0030532 C:small nuclear ribonucleoprotein complex
    • GO:0006397 P:mRNA processing
    • GO:0008380 P:RNA splicing
  • Pfam:
    • PF01423 LSM
  • PROSITE:
    • PS52002 SM
  • CDD:
    • cd01720 Sm_D2
• Amino Acid Sequences: MADTKIQELLTKPRNELTEYEISLLEEHEFSAGPLSILQTAVRSHTQVLISCRNNRKLLARVKAFDRHCNMVLENVKEMWTETPKLSNGKKGRPVNKDRFISKMFLRGDSVILVLLS

NoLS Predictions per Residue - Data Table

Residue Number, Score
1, 0.4
2, 0.4
3, 0.38
4, 0.35
5, 0.34
6, 0.32
7, 0.31
8, 0.27
9, 0.25
10, 0.23
11, 0.22
12, 0.16
13, 0.09
14, 0.08
15, 0.07
16, 0.07
17, 0.06
18, 0.08
19, 0.07
20, 0.06
21, 0.06
22, 0.07
23, 0.07
24, 0.07
25, 0.07
26, 0.07
27, 0.07
28, 0.1
29, 0.11
30, 0.11
31, 0.11
32, 0.13
33, 0.14
34, 0.15
35, 0.19
36, 0.24
37, 0.27
38, 0.34
39, 0.39
40, 0.41
41, 0.41
42, 0.4
43, 0.4
44, 0.4
45, 0.44
46, 0.44
47, 0.41
48, 0.38
49, 0.41
50, 0.47
51, 0.45
52, 0.43
53, 0.39
54, 0.36
55, 0.34
56, 0.34
57, 0.3
58, 0.29
59, 0.3
60, 0.26
61, 0.23
62, 0.2
63, 0.18
64, 0.17
65, 0.18
66, 0.14
67, 0.14
68, 0.14
69, 0.14
70, 0.17
71, 0.2
72, 0.26
73, 0.27
74, 0.34
75, 0.37
76, 0.43
77, 0.52
78, 0.58
79, 0.64
80, 0.68
81, 0.76
82, 0.77
83, 0.8
84, 0.79
85, 0.71
86, 0.69
87, 0.62
88, 0.57
89, 0.49
90, 0.47
91, 0.4
92, 0.36
93, 0.37
94, 0.31
95, 0.3
96, 0.25
97, 0.23