Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A1Y1W985

Protein Details
Accession A0A1Y1W985    Localization Confidence Medium Confidence Score 12.7
NoLS Segment(s)
PositionSequenceProtein Nature
82-101DDTPKPKARKREATSSRDRDBasic
NLS Segment(s)
PositionSequence
86-121KPKARKREATSSRDRDSGTRGRGRGRGRGRGRGGRR
Subcellular Location(s) nucl 18.5, cyto_nucl 12, cyto 4.5, mito 4
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLSNETVTIELKNGTQVQGTITNVDMSMNTHLKKVKMTVKGRDPVSLDSLSLRGNNIRFYILPDSLPLDTLLIDDTPKPKARKREATSSRDRDSGTRGRGRGRGRGRGRGGRR
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.26
2 0.21
3 0.18
4 0.17
5 0.15
6 0.13
7 0.16
8 0.16
9 0.15
10 0.13
11 0.13
12 0.14
13 0.17
14 0.17
15 0.15
16 0.14
17 0.14
18 0.13
19 0.13
20 0.1
21 0.08
22 0.12
23 0.15
24 0.15
25 0.17
26 0.19
27 0.2
28 0.21
29 0.25
30 0.28
31 0.34
32 0.39
33 0.44
34 0.49
35 0.54
36 0.54
37 0.51
38 0.46
39 0.38
40 0.36
41 0.29
42 0.21
43 0.16
44 0.16
45 0.13
46 0.12
47 0.1
48 0.09
49 0.09
50 0.1
51 0.1
52 0.1
53 0.1
54 0.13
55 0.16
56 0.14
57 0.14
58 0.13
59 0.15
60 0.13
61 0.14
62 0.11
63 0.08
64 0.07
65 0.07
66 0.07
67 0.05
68 0.06
69 0.07
70 0.08
71 0.13
72 0.19
73 0.23
74 0.28
75 0.38
76 0.47
77 0.57
78 0.61
79 0.68
80 0.72
81 0.76
82 0.82
83 0.79
84 0.73
85 0.66
86 0.61
87 0.52
88 0.5
89 0.49
90 0.47
91 0.46
92 0.45
93 0.48
94 0.54
95 0.56
96 0.59
97 0.59
98 0.62
99 0.62
100 0.69
101 0.72