A0A1Y2B2A0

UniProt ID: A0A1Y2B2A0   Organism: Neocallimastix californiae
Gene: LY90DRAFT_388030   Protein: U6 snRNA-associated Sm-like protein LSm7
Length: 138 AA

Protein Details

• Accession: A0A1Y2B2A0
• Localization Confidence: Low
• Confidence Score: 9.9
• NoLS Segment(s):

  Position	Sequence	Protein Nature
  7-28	GGNNNKNRGKNQNQDRPKTKEN	Hydrophilic

• Subcellular Location(s): nucl 18.5, cyto_nucl 13, cyto 6.5
• Family & Domain DBs:
  • InterPro:
    • IPR017132 Lsm7
    • IPR044641 Lsm7/SmG-like
    • IPR010920 LSM_dom_sf
    • IPR047575 Sm
    • IPR001163 Sm_dom_euk/arc
  • Gene Ontology:
    • GO:0005634 C:nucleus
    • GO:0000398 P:mRNA splicing, via spliceosome
    • GO:0000956 P:nuclear-transcribed mRNA catabolic process
  • Pfam:
    • PF01423 LSM
  • PROSITE:
    • PS52002 SM
  • CDD:
    • cd01729 LSm7
• Amino Acid Sequences: MDKNGRGGNNNKNRGKNQNQDRPKTKENILDLSRYIDKRVRVKFNGKREVTGILKGFDQLLNIVLDNTKEFLRDEELNITDETRDLGLVVLRGTAIMTVSPDELVEISNPFVK

NoLS Predictions per Residue - Data Table

Residue Number, Score
1, 0.74
2, 0.77
3, 0.76
4, 0.76
5, 0.77
6, 0.8
7, 0.82
8, 0.84
9, 0.82
10, 0.78
11, 0.73
12, 0.67
13, 0.63
14, 0.58
15, 0.56
16, 0.5
17, 0.44
18, 0.39
19, 0.38
20, 0.38
21, 0.31
22, 0.3
23, 0.26
24, 0.29
25, 0.35
26, 0.41
27, 0.44
28, 0.45
29, 0.55
30, 0.59
31, 0.66
32, 0.7
33, 0.63
34, 0.57
35, 0.51
36, 0.5
37, 0.41
38, 0.37
39, 0.28
40, 0.19
41, 0.18
42, 0.17
43, 0.16
44, 0.11
45, 0.1
46, 0.06
47, 0.07
48, 0.06
49, 0.06
50, 0.06
51, 0.06
52, 0.06
53, 0.06
54, 0.07
55, 0.06
56, 0.06
57, 0.07
58, 0.08
59, 0.12
60, 0.13
61, 0.14
62, 0.16
63, 0.17
64, 0.18
65, 0.18
66, 0.18
67, 0.13
68, 0.12
69, 0.12
70, 0.08
71, 0.07
72, 0.05
73, 0.06
74, 0.06
75, 0.07
76, 0.07
77, 0.06
78, 0.06
79, 0.06
80, 0.06
81, 0.05
82, 0.05
83, 0.05
84, 0.06
85, 0.07
86, 0.07
87, 0.07
88, 0.07
89, 0.08
90, 0.08
91, 0.08
92, 0.08
93, 0.08