A0A1Y2ASL7

UniProt ID: A0A1Y2ASL7   Organism: Neocallimastix californiae
Gene: LY90DRAFT_388937   Protein: Small nuclear ribonucleoprotein Sm D2
Length: 138 AA

Protein Details

• Accession: A0A1Y2ASL7
• Localization Confidence: Medium
• Confidence Score: 13.1
• NoLS Segment(s):

  Position	Sequence	Protein Nature
  67-86	TPKTGKGQKKAKPVNKDRFI	Hydrophilic

• NLS Segment(s):

  Position	Sequence
  75-78	KKAK

• Subcellular Location(s): nucl 18.5, cyto_nucl 12.5, cyto 5.5
• Family & Domain DBs:
  • InterPro:
    • IPR010920 LSM_dom_sf
    • IPR047575 Sm
    • IPR027248 Sm_D2
    • IPR001163 Sm_dom_euk/arc
  • Gene Ontology:
    • GO:0005829 C:cytosol
    • GO:0030532 C:small nuclear ribonucleoprotein complex
    • GO:0006397 P:mRNA processing
    • GO:0008380 P:RNA splicing
  • Pfam:
    • PF01423 LSM
  • PROSITE:
    • PS52002 SM
  • CDD:
    • cd01720 Sm_D2
• Amino Acid Sequences: MTEEELRKIEEEEFNTGPLSVLSQSVKNNTQILISCRNNRKLLARVKAFDRHMNMVLENVKEMWTETPKTGKGQKKAKPVNKDRFIPKMFLRGDSVIFSFEKHSKLNNTFFFI

NoLS Predictions per Residue - Data Table

Residue Number, Score
1, 0.26
2, 0.25
3, 0.24
4, 0.2
5, 0.15
6, 0.14
7, 0.08
8, 0.1
9, 0.11
10, 0.13
11, 0.15
12, 0.2
13, 0.22
14, 0.23
15, 0.23
16, 0.21
17, 0.22
18, 0.21
19, 0.24
20, 0.28
21, 0.3
22, 0.36
23, 0.42
24, 0.47
25, 0.47
26, 0.46
27, 0.47
28, 0.46
29, 0.5
30, 0.5
31, 0.47
32, 0.44
33, 0.46
34, 0.5
35, 0.47
36, 0.43
37, 0.38
38, 0.32
39, 0.31
40, 0.29
41, 0.25
42, 0.21
43, 0.2
44, 0.16
45, 0.13
46, 0.1
47, 0.08
48, 0.08
49, 0.08
50, 0.08
51, 0.1
52, 0.11
53, 0.12
54, 0.16
55, 0.17
56, 0.2
57, 0.28
58, 0.33
59, 0.39
60, 0.47
61, 0.52
62, 0.6
63, 0.69
64, 0.73
65, 0.75
66, 0.79
67, 0.81
68, 0.79
69, 0.79
70, 0.74
71, 0.73
72, 0.68
73, 0.62
74, 0.53
75, 0.52
76, 0.45
77, 0.41
78, 0.39
79, 0.32
80, 0.31
81, 0.28
82, 0.27
83, 0.2
84, 0.19
85, 0.17
86, 0.18
87, 0.2
88, 0.21
89, 0.21
90, 0.25
91, 0.32
92, 0.38
93, 0.46