Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A1Y1S3T6

Protein Details
Accession A0A1Y1S3T6    Localization Confidence Medium Confidence Score 11.8
NoLS Segment(s)
PositionSequenceProtein Nature
18-42KEMEAHARKKKRQLQEKKRERLDKSBasic
NLS Segment(s)
PositionSequence
23-38HARKKKRQLQEKKRER
Subcellular Location(s) nucl 14.5, cyto_nucl 13, cyto 10.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR003196  TFIIF_beta  
IPR040450  TFIIF_beta_HTH  
IPR036388  WH-like_DNA-bd_sf  
IPR036390  WH_DNA-bd_sf  
Gene Ontology GO:0005674  C:transcription factor TFIIF complex  
GO:0006367  P:transcription initiation at RNA polymerase II promoter  
Pfam View protein in Pfam  
PF02270  TFIIF_beta  
Amino Acid Sequences MINHFEQLKRGEKYTGLKEMEAHARKKKRQLQEKKRERLDKSDAIDVLFKAFEKHGAWTVKDLADFTGQPVAYIQEIIGEIAVLDKKDYKNTYILKKQFK
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.43
2 0.46
3 0.4
4 0.37
5 0.36
6 0.38
7 0.44
8 0.42
9 0.42
10 0.42
11 0.49
12 0.54
13 0.63
14 0.67
15 0.68
16 0.73
17 0.79
18 0.82
19 0.84
20 0.9
21 0.89
22 0.9
23 0.88
24 0.8
25 0.76
26 0.72
27 0.67
28 0.59
29 0.53
30 0.44
31 0.37
32 0.35
33 0.26
34 0.2
35 0.13
36 0.1
37 0.07
38 0.07
39 0.08
40 0.08
41 0.09
42 0.14
43 0.16
44 0.17
45 0.18
46 0.2
47 0.18
48 0.18
49 0.17
50 0.12
51 0.12
52 0.12
53 0.11
54 0.13
55 0.12
56 0.12
57 0.12
58 0.12
59 0.1
60 0.11
61 0.09
62 0.06
63 0.07
64 0.07
65 0.06
66 0.05
67 0.05
68 0.06
69 0.08
70 0.07
71 0.08
72 0.12
73 0.14
74 0.22
75 0.24
76 0.25
77 0.33
78 0.4
79 0.49
80 0.54