Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A1J9QJZ0

Protein Details
Accession A0A1J9QJZ0    Localization Confidence Medium Confidence Score 10.7
NoLS Segment(s)
PositionSequenceProtein Nature
75-96VDDTPKPKNKARKETDRGRGGRBasic
NLS Segment(s)
PositionSequence
80-118KPKNKARKETDRGRGGRGGGGGRGRGGGRGRGRGRGRGF
Subcellular Location(s) mito 10, nucl 8.5, cyto_nucl 7.5, cyto 5.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0003723  F:RNA binding  
GO:0000387  P:spliceosomal snRNP assembly  
GO:0008033  P:tRNA processing  
Pfam View protein in Pfam  
PF01423  LSM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MFLAIVTDSVVRNYLGTILHGTITSVSPQMNTALRTVKMTPKGRDPISLDTINIRGSTIRYYILPDSLPLDTLLVDDTPKPKNKARKETDRGRGGRGGGGGRGRGGGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.1
2 0.09
3 0.1
4 0.12
5 0.11
6 0.11
7 0.11
8 0.11
9 0.1
10 0.11
11 0.1
12 0.09
13 0.09
14 0.09
15 0.1
16 0.12
17 0.13
18 0.13
19 0.14
20 0.17
21 0.17
22 0.19
23 0.21
24 0.24
25 0.31
26 0.36
27 0.37
28 0.41
29 0.46
30 0.45
31 0.47
32 0.44
33 0.41
34 0.4
35 0.38
36 0.3
37 0.26
38 0.26
39 0.22
40 0.18
41 0.13
42 0.08
43 0.08
44 0.09
45 0.08
46 0.08
47 0.08
48 0.1
49 0.1
50 0.11
51 0.1
52 0.09
53 0.1
54 0.1
55 0.1
56 0.08
57 0.08
58 0.07
59 0.07
60 0.07
61 0.05
62 0.06
63 0.06
64 0.1
65 0.14
66 0.19
67 0.24
68 0.29
69 0.39
70 0.49
71 0.58
72 0.64
73 0.7
74 0.75
75 0.81
76 0.84
77 0.84
78 0.77
79 0.7
80 0.64
81 0.54
82 0.48
83 0.4
84 0.32
85 0.26
86 0.26
87 0.22
88 0.19
89 0.2
90 0.18
91 0.2
92 0.21
93 0.26
94 0.29
95 0.38
96 0.4
97 0.48
98 0.52