Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

C4QVC8

Protein Details
Accession C4QVC8    Localization Confidence Low Confidence Score 8.2
NoLS Segment(s)
PositionSequenceProtein Nature
76-97IDRARQKEQRARNWNNNNNSNNHydrophilic
NLS Segment(s)
Subcellular Location(s) nucl 10.5, cyto_nucl 7.5, mito 5, cyto 3.5, extr 3, pero 3
Family & Domain DBs
InterPro View protein in InterPro  
IPR034101  Lsm4  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005681  C:spliceosomal complex  
GO:0005682  C:U5 snRNP  
GO:0030620  F:U2 snRNA binding  
GO:0000398  P:mRNA splicing, via spliceosome  
GO:0000956  P:nuclear-transcribed mRNA catabolic process  
KEGG ppa:PAS_chr1-3_0142  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01723  LSm4  
Amino Acid Sequences MLPLFLLATAKGEPIQVELKNNVTINGYLVDCDSWMNLTLENVLEVDATGEHFKKFPQFYVHGVEIKGVRMDENIIDRARQKEQRARNWNNNNNSNNNQRRNYNNRYSANSSGGNRGNQRQR
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.12
2 0.17
3 0.17
4 0.2
5 0.21
6 0.24
7 0.27
8 0.27
9 0.24
10 0.21
11 0.2
12 0.17
13 0.17
14 0.14
15 0.11
16 0.11
17 0.1
18 0.08
19 0.08
20 0.07
21 0.06
22 0.07
23 0.07
24 0.07
25 0.07
26 0.08
27 0.08
28 0.08
29 0.07
30 0.05
31 0.05
32 0.04
33 0.05
34 0.04
35 0.05
36 0.06
37 0.07
38 0.07
39 0.07
40 0.08
41 0.13
42 0.14
43 0.15
44 0.18
45 0.2
46 0.22
47 0.27
48 0.28
49 0.24
50 0.23
51 0.23
52 0.18
53 0.16
54 0.14
55 0.1
56 0.08
57 0.07
58 0.08
59 0.07
60 0.09
61 0.12
62 0.11
63 0.12
64 0.15
65 0.18
66 0.23
67 0.27
68 0.31
69 0.37
70 0.46
71 0.56
72 0.64
73 0.69
74 0.74
75 0.79
76 0.81
77 0.82
78 0.82
79 0.76
80 0.72
81 0.69
82 0.69
83 0.68
84 0.67
85 0.62
86 0.59
87 0.63
88 0.66
89 0.69
90 0.69
91 0.69
92 0.66
93 0.69
94 0.7
95 0.65
96 0.61
97 0.57
98 0.49
99 0.48
100 0.47
101 0.46
102 0.44