Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A1B7NPN2

Protein Details
Accession A0A1B7NPN2    Localization Confidence Medium Confidence Score 11.5
NoLS Segment(s)
PositionSequenceProtein Nature
74-95VDDTPKPKNKARKETDRGRGGRBasic
NLS Segment(s)
PositionSequence
79-116KPKNKARKETDRGRGGRGGGGRGRGGGRGRGRGRGRGF
Subcellular Location(s) nucl 15, cyto_nucl 12.833, cyto 8.5, cyto_mito 6.666
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0003723  F:RNA binding  
GO:0000387  P:spliceosomal snRNP assembly  
GO:0008033  P:tRNA processing  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKCANETVTIELKNGTILHGTITSVSPQMNTALRTVKMTPKGRDPISLDTINIRGSTIRYYILPDSLPLDTLLVDDTPKPKNKARKETDRGRGGRGGGGRGRGGGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.19
2 0.15
3 0.11
4 0.1
5 0.11
6 0.11
7 0.11
8 0.1
9 0.11
10 0.11
11 0.11
12 0.11
13 0.09
14 0.1
15 0.12
16 0.13
17 0.13
18 0.14
19 0.17
20 0.17
21 0.19
22 0.21
23 0.24
24 0.31
25 0.37
26 0.37
27 0.41
28 0.47
29 0.45
30 0.47
31 0.45
32 0.41
33 0.4
34 0.38
35 0.3
36 0.26
37 0.26
38 0.22
39 0.18
40 0.13
41 0.08
42 0.08
43 0.09
44 0.08
45 0.08
46 0.08
47 0.1
48 0.1
49 0.11
50 0.1
51 0.09
52 0.1
53 0.1
54 0.1
55 0.08
56 0.08
57 0.07
58 0.07
59 0.07
60 0.05
61 0.06
62 0.06
63 0.1
64 0.15
65 0.19
66 0.24
67 0.29
68 0.39
69 0.49
70 0.58
71 0.64
72 0.71
73 0.75
74 0.81
75 0.85
76 0.84
77 0.77
78 0.7
79 0.65
80 0.55
81 0.5
82 0.42
83 0.37
84 0.3
85 0.31
86 0.27
87 0.26
88 0.25
89 0.26
90 0.26
91 0.29
92 0.32
93 0.39
94 0.41
95 0.48
96 0.52