Proteins with Predicted NoLSs

Proteins containing predicted nucleolar localization signals available in the database.

J5JFC0

Protein Details
Accession J5JFC0    Localization Confidence High Confidence Score 17.6
NoLS Segment(s)
PositionSequenceProtein Nature
27-54APTRGGRRSNYRSRSRDRRHHGDNSRGABasic
219-238GAVRKEKKTEYRQYMNRLGGHydrophilic
NLS Segment(s)
PositionSequence
26-113AAPTRGGRRSNYRSRSRDRRHHGDNSRGAAAASHEDRSRSPERRSNQQHHSHRGYSERGGGGRGGGRGGRDRRDGDYKPRRYDEHRRR
134-148RGARDRRSPPRPRGR
Subcellular Location(s) nucl 20.5, cyto_nucl 12.5, cyto 3.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR013957  SNRNP27  
Gene Ontology GO:0005634  C:nucleus  
GO:0006397  P:mRNA processing  
GO:0008380  P:RNA splicing  
Pfam View protein in Pfam  
PF08648  SNRNP27  
Amino Acid Sequences MSDQRRGRRPDTRRDWDAPPDRRDDAAPTRGGRRSNYRSRSRDRRHHGDNSRGAAAASHEDRSRSPERRSNQQHHSHRGYSERGGGGRGGGRGGRDRRDGDYKPRRYDEHRRRRDYYDDGGDDDDDRDYDFDRRGARDRRSPPRPRGRSEDRMDTDPKPPTTSKNTKPTTAAAAAAVPVTAEGGGGDDDDDEMSAMQAMMGFGGFGTTKNKHVAGNNAGAVRKEKKTEYRQYMNRLGGFNRALSPTRD
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.76
2 0.74
3 0.74
4 0.76
5 0.74
6 0.68
7 0.64
8 0.59
9 0.55
10 0.51
11 0.47
12 0.45
13 0.42
14 0.42
15 0.39
16 0.43
17 0.46
18 0.48
19 0.45
20 0.48
21 0.51
22 0.57
23 0.63
24 0.67
25 0.72
26 0.78
27 0.85
28 0.85
29 0.86
30 0.85
31 0.85
32 0.83
33 0.85
34 0.83
35 0.82
36 0.78
37 0.72
38 0.64
39 0.54
40 0.46
41 0.36
42 0.29
43 0.24
44 0.19
45 0.17
46 0.17
47 0.18
48 0.18
49 0.25
50 0.31
51 0.32
52 0.37
53 0.42
54 0.46
55 0.56
56 0.65
57 0.66
58 0.68
59 0.72
60 0.74
61 0.75
62 0.76
63 0.68
64 0.61
65 0.57
66 0.51
67 0.42
68 0.38
69 0.31
70 0.25
71 0.23
72 0.21
73 0.18
74 0.16
75 0.14
76 0.11
77 0.1
78 0.11
79 0.17
80 0.2
81 0.22
82 0.25
83 0.26
84 0.3
85 0.36
86 0.37
87 0.42
88 0.49
89 0.52
90 0.54
91 0.55
92 0.54
93 0.55
94 0.64
95 0.64
96 0.65
97 0.68
98 0.7
99 0.71
100 0.72
101 0.7
102 0.64
103 0.58
104 0.52
105 0.43
106 0.37
107 0.33
108 0.29
109 0.23
110 0.18
111 0.13
112 0.07
113 0.06
114 0.05
115 0.06
116 0.07
117 0.08
118 0.1
119 0.11
120 0.14
121 0.21
122 0.27
123 0.31
124 0.38
125 0.46
126 0.54
127 0.62
128 0.69
129 0.72
130 0.76
131 0.78
132 0.74
133 0.74
134 0.73
135 0.72
136 0.69
137 0.68
138 0.6
139 0.58
140 0.57
141 0.5
142 0.46
143 0.42
144 0.38
145 0.32
146 0.3
147 0.31
148 0.37
149 0.44
150 0.47
151 0.52
152 0.54
153 0.53
154 0.54
155 0.51
156 0.46
157 0.38
158 0.31
159 0.21
160 0.18
161 0.16
162 0.14
163 0.11
164 0.06
165 0.04
166 0.04
167 0.03
168 0.03
169 0.03
170 0.03
171 0.04
172 0.04
173 0.04
174 0.04
175 0.04
176 0.04
177 0.04
178 0.04
179 0.04
180 0.04
181 0.04
182 0.04
183 0.04
184 0.04
185 0.04
186 0.04
187 0.04
188 0.03
189 0.03
190 0.04
191 0.04
192 0.05
193 0.1
194 0.12
195 0.15
196 0.19
197 0.21
198 0.23
199 0.27
200 0.34
201 0.34
202 0.38
203 0.38
204 0.38
205 0.38
206 0.36
207 0.37
208 0.35
209 0.34
210 0.33
211 0.36
212 0.43
213 0.52
214 0.62
215 0.66
216 0.71
217 0.75
218 0.79
219 0.81
220 0.78
221 0.71
222 0.64
223 0.56
224 0.52
225 0.46
226 0.39
227 0.34
228 0.31