A0A138ZWW8

UniProt ID: A0A138ZWW8   Organism: Gonapodya prolifera (strain JEL478)
Gene: M427DRAFT_90045   Protein: Nonsense-mediated decay UPF3 (Fragment)
Length: 103 AA

Protein Details

• Accession: A0A138ZWW8
• Localization Confidence: Medium
• Confidence Score: 11.3
• NoLS Segment(s):

  Position	Sequence	Protein Nature
  45-68	VPPSASSAKKPRRQDPRQNTIDRD	Hydrophilic

• Subcellular Location(s): nucl 23.5, cyto_nucl 14
• Family & Domain DBs:
  • InterPro:
    • IPR012677 Nucleotide-bd_a/b_plait_sf
    • IPR035979 RBD_domain_sf
    • IPR039722 Upf3
    • IPR005120 UPF3_dom
  • Gene Ontology:
    • GO:0003676 F:nucleic acid binding
    • GO:0000184 P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
  • Pfam:
    • PF03467 Smg4_UPF3
  • CDD:
    • cd12455 RRM_like_Smg4_UPF3
• Amino Acid Sequences: SRAYLNFTSLDALAHFASEFNGHSFIDSKGNHFRAIVEFSPFQRVPPSASSAKKPRRQDPRQNTIDRDADYLAFLEHL

NoLS Predictions per Residue - Data Table

Residue Number, Score
1, 0.1
2, 0.09
3, 0.07
4, 0.08
5, 0.08
6, 0.09
7, 0.08
8, 0.1
9, 0.09
10, 0.1
11, 0.11
12, 0.12
13, 0.17
14, 0.17
15, 0.19
16, 0.25
17, 0.27
18, 0.26
19, 0.25
20, 0.25
21, 0.2
22, 0.24
23, 0.21
24, 0.17
25, 0.16
26, 0.17
27, 0.23
28, 0.22
29, 0.2
30, 0.18
31, 0.18
32, 0.17
33, 0.18
34, 0.23
35, 0.23
36, 0.25
37, 0.32
38, 0.4
39, 0.49
40, 0.54
41, 0.59
42, 0.63
43, 0.68
44, 0.76
45, 0.81
46, 0.81
47, 0.82
48, 0.84
49, 0.83
50, 0.78
51, 0.74
52, 0.68
53, 0.58
54, 0.5
55, 0.41
56, 0.32
57, 0.27
58, 0.23