Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A0L0VTG6

Protein Details
Accession A0A0L0VTG6    Localization Confidence Medium Confidence Score 10.6
NoLS Segment(s)
PositionSequenceProtein Nature
82-102DDAPKPKKKKDGDARGRGRGRBasic
NLS Segment(s)
PositionSequence
85-132PKPKKKKDGDARGRGRGRGGGGGGGGGGGGGDRGGRSRGRGRGRTRGI
Subcellular Location(s) nucl 11.5, cyto_nucl 10.333, cyto 8, cyto_mito 7.833, mito 6.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLIRFLMKLNQETVTIELKNGTVVHGTISGVDVAMNTHLKAVKMTVRNREPQQLDSLSIRGSNIRYIILPDSLPLDTLLIDDAPKPKKKKDGDARGRGRGRGGGGGGGGGGGGGDRGGRSRGRGRGRTRGI
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.33
2 0.29
3 0.21
4 0.18
5 0.17
6 0.16
7 0.17
8 0.15
9 0.13
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.06
20 0.05
21 0.05
22 0.07
23 0.07
24 0.07
25 0.09
26 0.1
27 0.1
28 0.1
29 0.12
30 0.16
31 0.23
32 0.28
33 0.35
34 0.38
35 0.44
36 0.47
37 0.52
38 0.48
39 0.43
40 0.43
41 0.35
42 0.32
43 0.27
44 0.25
45 0.18
46 0.16
47 0.14
48 0.11
49 0.1
50 0.09
51 0.09
52 0.08
53 0.08
54 0.09
55 0.1
56 0.09
57 0.09
58 0.08
59 0.09
60 0.08
61 0.09
62 0.07
63 0.07
64 0.06
65 0.06
66 0.06
67 0.04
68 0.05
69 0.06
70 0.11
71 0.17
72 0.23
73 0.26
74 0.3
75 0.39
76 0.44
77 0.53
78 0.59
79 0.65
80 0.69
81 0.77
82 0.8
83 0.81
84 0.79
85 0.69
86 0.6
87 0.51
88 0.42
89 0.34
90 0.27
91 0.18
92 0.15
93 0.14
94 0.12
95 0.09
96 0.07
97 0.04
98 0.03
99 0.02
100 0.02
101 0.02
102 0.03
103 0.03
104 0.05
105 0.08
106 0.1
107 0.16
108 0.23
109 0.33
110 0.42
111 0.51
112 0.57