Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A0D0BIB1

Protein Details
Accession A0A0D0BIB1    Localization Confidence Medium Confidence Score 11
NoLS Segment(s)
PositionSequenceProtein Nature
78-99VDDAPKPKGRKKDEGRDRGRGRBasic
NLS Segment(s)
PositionSequence
82-117PKPKGRKKDEGRDRGRGRARGMDRGRGRGRGRGRGF
Subcellular Location(s) nucl 13, cyto_nucl 11.833, cyto 8.5, cyto_pero 5.166, mito 5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences VRFLMKLNNETVTIELKNGSLVHGTITGVDMQMNTYLKTVKMTARNRDPTSLDSLSIRGNNVRYFVLPDALPLDTLLVDDAPKPKGRKKDEGRDRGRGRARGMDRGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.18
2 0.16
3 0.14
4 0.15
5 0.14
6 0.13
7 0.1
8 0.1
9 0.1
10 0.1
11 0.1
12 0.08
13 0.09
14 0.08
15 0.07
16 0.08
17 0.06
18 0.06
19 0.09
20 0.1
21 0.09
22 0.1
23 0.11
24 0.11
25 0.12
26 0.13
27 0.15
28 0.24
29 0.3
30 0.37
31 0.45
32 0.53
33 0.53
34 0.53
35 0.5
36 0.43
37 0.44
38 0.36
39 0.28
40 0.21
41 0.2
42 0.19
43 0.17
44 0.16
45 0.1
46 0.12
47 0.11
48 0.12
49 0.12
50 0.11
51 0.12
52 0.12
53 0.12
54 0.1
55 0.1
56 0.1
57 0.1
58 0.1
59 0.07
60 0.07
61 0.05
62 0.06
63 0.05
64 0.04
65 0.04
66 0.06
67 0.08
68 0.1
69 0.15
70 0.19
71 0.24
72 0.34
73 0.41
74 0.5
75 0.57
76 0.66
77 0.73
78 0.8
79 0.82
80 0.83
81 0.8
82 0.79
83 0.77
84 0.71
85 0.64
86 0.62
87 0.59
88 0.59
89 0.59
90 0.6
91 0.57
92 0.61
93 0.62
94 0.61
95 0.6
96 0.58
97 0.62