Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

Q6BPI2

Protein Details
Accession Q6BPI2    Localization Confidence Medium Confidence Score 10.5
NoLS Segment(s)
PositionSequenceProtein Nature
87-106KPGDKPKPPVRGPPPKRVKHBasic
NLS Segment(s)
PositionSequence
89-106GDKPKPPVRGPPPKRVKH
Subcellular Location(s) cyto_nucl 13.166, nucl 13, cyto 11, cyto_mito 7.499, cyto_pero 6.499
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
IPR034099  SmD3  
Gene Ontology GO:0005829  C:cytosol  
GO:0120114  C:Sm-like protein family complex  
GO:0005681  C:spliceosomal complex  
GO:0000387  P:spliceosomal snRNP assembly  
KEGG dha:DEHA2E13420g  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01721  Sm_D3  
Amino Acid Sequences MSAGIPVKLLNEAQGHIISLELTTGDTYRGKLLENEDNMNLSLYDVTITKGRTGNTSYMNQVFVRGSMIRFVMVPEILKNAPMFFMKPGDKPKPPVRGPPPKRVKH
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.16
2 0.15
3 0.13
4 0.13
5 0.09
6 0.08
7 0.07
8 0.05
9 0.05
10 0.05
11 0.05
12 0.07
13 0.08
14 0.09
15 0.1
16 0.11
17 0.11
18 0.13
19 0.17
20 0.22
21 0.23
22 0.25
23 0.24
24 0.24
25 0.23
26 0.21
27 0.17
28 0.1
29 0.08
30 0.05
31 0.06
32 0.05
33 0.06
34 0.07
35 0.08
36 0.1
37 0.12
38 0.12
39 0.13
40 0.15
41 0.17
42 0.19
43 0.2
44 0.2
45 0.19
46 0.21
47 0.18
48 0.18
49 0.15
50 0.12
51 0.13
52 0.11
53 0.1
54 0.1
55 0.1
56 0.09
57 0.09
58 0.09
59 0.09
60 0.08
61 0.09
62 0.08
63 0.11
64 0.11
65 0.12
66 0.12
67 0.11
68 0.12
69 0.12
70 0.13
71 0.11
72 0.17
73 0.19
74 0.24
75 0.33
76 0.39
77 0.43
78 0.49
79 0.56
80 0.6
81 0.62
82 0.67
83 0.69
84 0.73
85 0.75
86 0.79