Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A0D0A550

Protein Details
Accession A0A0D0A550    Localization Confidence Medium Confidence Score 10.6
NoLS Segment(s)
PositionSequenceProtein Nature
1-24MEQPKQSSRKQKQKDARSNSYNDGHydrophilic
NLS Segment(s)
Subcellular Location(s) nucl 20.5, cyto_nucl 12, mito 4
Family & Domain DBs
InterPro View protein in InterPro  
IPR012677  Nucleotide-bd_a/b_plait_sf  
IPR035979  RBD_domain_sf  
IPR039722  Upf3  
IPR005120  UPF3_dom  
Gene Ontology GO:0003676  F:nucleic acid binding  
GO:0000184  P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  
Pfam View protein in Pfam  
PF03467  Smg4_UPF3  
CDD cd12455  RRM_like_Smg4_UPF3  
Amino Acid Sequences MEQPKQSSRKQKQKDARSNSYNDGNGTERLKIIVRRLPHNLPEEVFWQSVQAWVTEETATWKMFCAGKMKKRINKESVPSRAYIAFKNEEALATFSRAYDGHTFRDKSGNESHAVVEFAPYQKVPVEKRKPDPRINTIDKDEDYISFLESLKKSDKSEPVSLEALGKSSS
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.91
2 0.9
3 0.89
4 0.85
5 0.81
6 0.76
7 0.72
8 0.62
9 0.52
10 0.46
11 0.38
12 0.35
13 0.31
14 0.27
15 0.2
16 0.2
17 0.22
18 0.22
19 0.25
20 0.26
21 0.28
22 0.33
23 0.39
24 0.42
25 0.44
26 0.46
27 0.42
28 0.38
29 0.36
30 0.33
31 0.3
32 0.25
33 0.19
34 0.15
35 0.13
36 0.15
37 0.13
38 0.11
39 0.1
40 0.1
41 0.11
42 0.1
43 0.1
44 0.12
45 0.13
46 0.13
47 0.12
48 0.11
49 0.12
50 0.14
51 0.15
52 0.2
53 0.25
54 0.31
55 0.41
56 0.49
57 0.52
58 0.59
59 0.66
60 0.65
61 0.64
62 0.64
63 0.63
64 0.62
65 0.58
66 0.5
67 0.44
68 0.4
69 0.35
70 0.29
71 0.24
72 0.18
73 0.17
74 0.17
75 0.16
76 0.13
77 0.12
78 0.13
79 0.09
80 0.09
81 0.09
82 0.08
83 0.09
84 0.09
85 0.11
86 0.14
87 0.16
88 0.18
89 0.24
90 0.25
91 0.25
92 0.32
93 0.29
94 0.28
95 0.32
96 0.3
97 0.26
98 0.26
99 0.26
100 0.2
101 0.2
102 0.16
103 0.12
104 0.11
105 0.11
106 0.11
107 0.1
108 0.1
109 0.12
110 0.16
111 0.2
112 0.29
113 0.38
114 0.45
115 0.55
116 0.65
117 0.71
118 0.76
119 0.78
120 0.76
121 0.76
122 0.75
123 0.71
124 0.66
125 0.62
126 0.54
127 0.49
128 0.42
129 0.32
130 0.27
131 0.22
132 0.18
133 0.14
134 0.14
135 0.17
136 0.17
137 0.2
138 0.24
139 0.27
140 0.29
141 0.36
142 0.43
143 0.43
144 0.49
145 0.49
146 0.48
147 0.46
148 0.44
149 0.39
150 0.32