Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A0M9VTC5

Protein Details
Accession A0A0M9VTC5    Localization Confidence Medium Confidence Score 11.1
NoLS Segment(s)
PositionSequenceProtein Nature
82-102DDAPKPKNKARKETDRGRGGRBasic
NLS Segment(s)
PositionSequence
85-119PKPKNKARKETDRGRGGRGRGGRGGRGRGRGRGRG
Subcellular Location(s) nucl 13.5, cyto_nucl 10.333, cyto_mito 6.833, mito 6.5, cyto 6
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKCANETVTIELKNGTIVHGTISSVSPQMNTALRNVKMTPRGQDPIQLDTMNIRGSTIRYFILPDSLPLDTLLIDDAPKPKNKARKETDRGRGGRGRGGRGGRGRGRGRGRG
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.32
2 0.28
3 0.25
4 0.23
5 0.21
6 0.19
7 0.19
8 0.17
9 0.14
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.09
16 0.1
17 0.1
18 0.1
19 0.1
20 0.09
21 0.09
22 0.11
23 0.12
24 0.12
25 0.15
26 0.2
27 0.2
28 0.22
29 0.22
30 0.24
31 0.28
32 0.29
33 0.29
34 0.28
35 0.3
36 0.28
37 0.33
38 0.3
39 0.27
40 0.27
41 0.24
42 0.19
43 0.17
44 0.18
45 0.13
46 0.11
47 0.08
48 0.07
49 0.08
50 0.08
51 0.09
52 0.08
53 0.08
54 0.09
55 0.09
56 0.11
57 0.1
58 0.1
59 0.11
60 0.11
61 0.11
62 0.1
63 0.1
64 0.07
65 0.07
66 0.07
67 0.05
68 0.05
69 0.06
70 0.11
71 0.14
72 0.17
73 0.21
74 0.27
75 0.36
76 0.43
77 0.52
78 0.57
79 0.65
80 0.71
81 0.77
82 0.81
83 0.82
84 0.77
85 0.74
86 0.71
87 0.62
88 0.6
89 0.55
90 0.5
91 0.47
92 0.48
93 0.48
94 0.49
95 0.55
96 0.54
97 0.58
98 0.58
99 0.6