Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

Q6BPZ1

Protein Details
Accession Q6BPZ1    Localization Confidence Medium Confidence Score 10.2
NoLS Segment(s)
PositionSequenceProtein Nature
1-26MDNPRQNNNNNNTNRRRNNNSSKPDGHydrophilic
NLS Segment(s)
Subcellular Location(s) nucl 13, mito 7, cyto 5
Family & Domain DBs
InterPro View protein in InterPro  
IPR017132  Lsm7  
IPR044641  Lsm7/SmG-like  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:0032991  C:protein-containing complex  
GO:0000398  P:mRNA splicing, via spliceosome  
GO:0000956  P:nuclear-transcribed mRNA catabolic process  
KEGG dha:DEHA2E09724g  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01729  LSm7  
Amino Acid Sequences MDNPRQNNNNNNTNRRRNNNSSKPDGPKREAILDLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIRDPEDDNVLTDKTRDIGFVVVRGPSLLTISPVDGSEIIDNPFANQEE
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.8
2 0.79
3 0.81
4 0.81
5 0.84
6 0.84
7 0.82
8 0.8
9 0.79
10 0.79
11 0.8
12 0.77
13 0.7
14 0.66
15 0.61
16 0.56
17 0.5
18 0.43
19 0.4
20 0.38
21 0.36
22 0.34
23 0.35
24 0.31
25 0.3
26 0.32
27 0.28
28 0.32
29 0.34
30 0.36
31 0.36
32 0.42
33 0.45
34 0.44
35 0.5
36 0.41
37 0.36
38 0.29
39 0.28
40 0.22
41 0.19
42 0.16
43 0.08
44 0.08
45 0.08
46 0.08
47 0.06
48 0.06
49 0.05
50 0.06
51 0.06
52 0.05
53 0.05
54 0.05
55 0.05
56 0.05
57 0.06
58 0.05
59 0.06
60 0.07
61 0.08
62 0.09
63 0.1
64 0.11
65 0.14
66 0.16
67 0.15
68 0.16
69 0.17
70 0.16
71 0.15
72 0.14
73 0.11
74 0.1
75 0.1
76 0.09
77 0.08
78 0.1
79 0.11
80 0.12
81 0.13
82 0.12
83 0.11
84 0.11
85 0.11
86 0.08
87 0.09
88 0.08
89 0.09
90 0.09
91 0.1
92 0.11
93 0.11
94 0.12
95 0.11
96 0.12
97 0.12
98 0.13
99 0.13
100 0.14
101 0.14
102 0.13