Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

O60138

Protein Details
Accession O60138    Localization Confidence High Confidence Score 17.8
NoLS Segment(s)
PositionSequenceProtein Nature
79-103LASYEKPKKEHPKLRPSKKKATLDDBasic
196-223ESNENKVVFKKKKSGKLRTKSSLKEYDQHydrophilic
NLS Segment(s)
PositionSequence
84-98KPKKEHPKLRPSKKK
205-214KKKKSGKLRT
Subcellular Location(s) nucl 21, cyto_nucl 12.5, mito 3
Family & Domain DBs
InterPro View protein in InterPro  
IPR000690  Matrin/U1-C_Znf_C2H2  
IPR003604  Matrin/U1-like-C_Znf_C2H2  
IPR013085  U1-CZ_Znf_C2H2  
IPR040023  WBP4  
IPR036236  Znf_C2H2_sf  
Gene Ontology GO:0005730  C:nucleolus  
GO:0005634  C:nucleus  
GO:0071011  C:precatalytic spliceosome  
GO:0071005  C:U2-type precatalytic spliceosome  
GO:0003723  F:RNA binding  
GO:0008270  F:zinc ion binding  
GO:0045292  P:mRNA cis splicing, via spliceosome  
GO:0008380  P:RNA splicing  
KEGG spo:SPBC18H10.07  -  
Pfam View protein in Pfam  
PF06220  zf-U1  
PROSITE View protein in PROSITE  
PS50171  ZF_MATRIN  
Amino Acid Sequences MADYWKSIPKYYCKYCQIFVKDTPFARRSHEQTYKHQDAIKKVMDDIHRSNLLRQELEKNLSIPKSATATTASAVSSELASYEKPKKEHPKLRPSKKKATLDDWDIPTSSTETDTISTTHTSYIPTLLAKQEENEETKETTTNKNESLPGTSLKRNREIIEKEERSSFHFRVKPKNLDKVPKLAENEGNKSLESKESNENKVVFKKKKSGKLRTKSSLKEYDQS
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.65
2 0.65
3 0.69
4 0.67
5 0.63
6 0.62
7 0.6
8 0.57
9 0.56
10 0.59
11 0.53
12 0.47
13 0.49
14 0.5
15 0.47
16 0.51
17 0.57
18 0.54
19 0.61
20 0.7
21 0.68
22 0.64
23 0.62
24 0.57
25 0.54
26 0.56
27 0.51
28 0.42
29 0.37
30 0.4
31 0.39
32 0.41
33 0.38
34 0.37
35 0.36
36 0.36
37 0.38
38 0.39
39 0.38
40 0.33
41 0.32
42 0.32
43 0.31
44 0.33
45 0.31
46 0.27
47 0.28
48 0.27
49 0.25
50 0.2
51 0.18
52 0.17
53 0.16
54 0.16
55 0.14
56 0.14
57 0.14
58 0.14
59 0.12
60 0.1
61 0.1
62 0.09
63 0.07
64 0.06
65 0.06
66 0.05
67 0.06
68 0.1
69 0.17
70 0.2
71 0.22
72 0.3
73 0.4
74 0.5
75 0.59
76 0.64
77 0.68
78 0.76
79 0.85
80 0.89
81 0.86
82 0.86
83 0.86
84 0.85
85 0.78
86 0.74
87 0.67
88 0.63
89 0.6
90 0.52
91 0.43
92 0.35
93 0.31
94 0.25
95 0.2
96 0.14
97 0.09
98 0.07
99 0.07
100 0.07
101 0.08
102 0.08
103 0.08
104 0.09
105 0.09
106 0.09
107 0.09
108 0.09
109 0.09
110 0.09
111 0.08
112 0.08
113 0.09
114 0.09
115 0.1
116 0.1
117 0.1
118 0.12
119 0.13
120 0.15
121 0.16
122 0.16
123 0.16
124 0.16
125 0.18
126 0.17
127 0.21
128 0.23
129 0.24
130 0.24
131 0.25
132 0.26
133 0.24
134 0.26
135 0.22
136 0.22
137 0.23
138 0.28
139 0.31
140 0.33
141 0.37
142 0.37
143 0.37
144 0.42
145 0.42
146 0.42
147 0.47
148 0.46
149 0.42
150 0.43
151 0.42
152 0.39
153 0.42
154 0.38
155 0.36
156 0.38
157 0.41
158 0.48
159 0.56
160 0.61
161 0.61
162 0.7
163 0.68
164 0.73
165 0.72
166 0.7
167 0.66
168 0.62
169 0.58
170 0.52
171 0.52
172 0.49
173 0.51
174 0.46
175 0.42
176 0.36
177 0.34
178 0.31
179 0.3
180 0.26
181 0.25
182 0.31
183 0.37
184 0.41
185 0.44
186 0.45
187 0.45
188 0.51
189 0.58
190 0.56
191 0.56
192 0.62
193 0.66
194 0.74
195 0.8
196 0.82
197 0.83
198 0.85
199 0.89
200 0.89
201 0.89
202 0.87
203 0.85
204 0.84