Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A0C3SE01

Protein Details
Accession A0A0C3SE01    Localization Confidence Low Confidence Score 8
NoLS Segment(s)
PositionSequenceProtein Nature
15-39STTTTTSSRRRTPRARARTKMASKHHydrophilic
NLS Segment(s)
PositionSequence
23-35RRRTPRARARTKM
Subcellular Location(s) mito 23.5, cyto_mito 13.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR020708  DNA-dir_RNA_polK_14-18kDa_CS  
IPR006110  Pol_omega/Rpo6/RPB6  
IPR028363  RPB6  
IPR036161  RPB6/omega-like_sf  
IPR006111  Rpo6/Rpb6  
Gene Ontology GO:0005665  C:RNA polymerase II, core complex  
GO:0003677  F:DNA binding  
GO:0003899  F:DNA-directed 5'-3' RNA polymerase activity  
GO:0006351  P:DNA-templated transcription  
Pfam View protein in Pfam  
PF01192  RNA_pol_Rpb6  
PROSITE View protein in PROSITE  
PS01111  RNA_POL_K_14KD  
Amino Acid Sequences MTMITKVLVSAKRHSTTTTTSSRRRTPRARARTKMASKHPGEASANAAGAGLAGERQANKVRVTTPYLTKYERARVLGTRALQISMNAPVLVPLDGETDALQIAIKELSQRKIPLIIRRYLPDGSFEDWSVSELITD
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.41
2 0.39
3 0.39
4 0.42
5 0.45
6 0.45
7 0.5
8 0.56
9 0.62
10 0.66
11 0.71
12 0.73
13 0.74
14 0.77
15 0.81
16 0.84
17 0.82
18 0.81
19 0.82
20 0.82
21 0.79
22 0.77
23 0.75
24 0.67
25 0.67
26 0.59
27 0.53
28 0.46
29 0.39
30 0.33
31 0.25
32 0.23
33 0.16
34 0.15
35 0.1
36 0.08
37 0.07
38 0.04
39 0.03
40 0.03
41 0.04
42 0.04
43 0.06
44 0.1
45 0.12
46 0.13
47 0.15
48 0.16
49 0.18
50 0.22
51 0.23
52 0.23
53 0.25
54 0.27
55 0.27
56 0.29
57 0.29
58 0.31
59 0.3
60 0.28
61 0.26
62 0.25
63 0.27
64 0.27
65 0.25
66 0.22
67 0.2
68 0.18
69 0.17
70 0.16
71 0.13
72 0.12
73 0.11
74 0.09
75 0.08
76 0.08
77 0.09
78 0.08
79 0.07
80 0.05
81 0.06
82 0.07
83 0.07
84 0.07
85 0.06
86 0.06
87 0.06
88 0.06
89 0.04
90 0.05
91 0.05
92 0.05
93 0.1
94 0.14
95 0.17
96 0.21
97 0.23
98 0.23
99 0.31
100 0.36
101 0.39
102 0.41
103 0.44
104 0.44
105 0.46
106 0.49
107 0.44
108 0.39
109 0.35
110 0.33
111 0.3
112 0.29
113 0.26
114 0.23
115 0.21
116 0.22
117 0.18