Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

Q6FJP5

Protein Details
Accession Q6FJP5    Localization Confidence Medium Confidence Score 12.9
NoLS Segment(s)
PositionSequenceProtein Nature
76-99LKNAPLFKKNQSRQPPPVRGPRRRHydrophilic
NLS Segment(s)
PositionSequence
88-99RQPPPVRGPRRR
Subcellular Location(s) nucl 19.5, cyto_nucl 13.5, cyto 6.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
IPR034099  SmD3  
Gene Ontology GO:0000243  C:commitment complex  
GO:0005829  C:cytosol  
GO:0071014  C:post-mRNA release spliceosomal complex  
GO:0005685  C:U1 snRNP  
GO:0005686  C:U2 snRNP  
GO:0071004  C:U2-type prespliceosome  
GO:0005687  C:U4 snRNP  
GO:0046540  C:U4/U6 x U5 tri-snRNP complex  
GO:0005682  C:U5 snRNP  
GO:0003729  F:mRNA binding  
GO:0036261  P:7-methylguanosine cap hypermethylation  
GO:0000387  P:spliceosomal snRNP assembly  
KEGG cgr:CAGL0M04631g  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01721  Sm_D3  
Amino Acid Sequences MSNIPVKLLSEAQGHVVTIELNNGDTYRGKLVESEDNMNVQLRDVMVTSSTQKLSRMDHVFVRGSHIRFFVVPDMLKNAPLFKKNQSRQPPPVRGPRRR
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.18
2 0.15
3 0.14
4 0.11
5 0.09
6 0.1
7 0.07
8 0.07
9 0.07
10 0.07
11 0.09
12 0.09
13 0.11
14 0.12
15 0.12
16 0.11
17 0.12
18 0.15
19 0.2
20 0.22
21 0.23
22 0.21
23 0.21
24 0.22
25 0.21
26 0.18
27 0.12
28 0.1
29 0.07
30 0.06
31 0.06
32 0.06
33 0.05
34 0.06
35 0.08
36 0.09
37 0.1
38 0.1
39 0.11
40 0.13
41 0.14
42 0.21
43 0.22
44 0.22
45 0.23
46 0.26
47 0.26
48 0.25
49 0.29
50 0.26
51 0.25
52 0.24
53 0.23
54 0.21
55 0.19
56 0.21
57 0.17
58 0.16
59 0.15
60 0.15
61 0.19
62 0.18
63 0.2
64 0.19
65 0.22
66 0.22
67 0.26
68 0.28
69 0.33
70 0.43
71 0.48
72 0.58
73 0.63
74 0.68
75 0.75
76 0.82
77 0.83
78 0.81
79 0.85