Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A0L0HN13

Protein Details
Accession A0A0L0HN13    Localization Confidence Medium Confidence Score 13.6
NoLS Segment(s)
PositionSequenceProtein Nature
82-103DDSPKSKGKKKDGKAPMGRGRGBasic
NLS Segment(s)
PositionSequence
86-118KSKGKKKDGKAPMGRGRGRGRGRGRGRGRGRGG
Subcellular Location(s) nucl 15, mito 8, cyto 4
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKCNNETVTIELKNGTIVHGTITGVDMQMNTHLKTVKMTVRNKDPVNLETLSIRGNNIRYFILPDSLPLDTLLVDDSPKSKGKKKDGKAPMGRGRGRGRGRGRGRGRGRGG
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.37
2 0.33
3 0.26
4 0.26
5 0.23
6 0.2
7 0.2
8 0.18
9 0.15
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.07
20 0.06
21 0.06
22 0.1
23 0.12
24 0.12
25 0.13
26 0.14
27 0.14
28 0.15
29 0.19
30 0.2
31 0.27
32 0.31
33 0.35
34 0.42
35 0.48
36 0.47
37 0.47
38 0.44
39 0.36
40 0.35
41 0.3
42 0.23
43 0.17
44 0.17
45 0.14
46 0.11
47 0.11
48 0.08
49 0.1
50 0.1
51 0.11
52 0.11
53 0.1
54 0.13
55 0.13
56 0.13
57 0.12
58 0.12
59 0.12
60 0.12
61 0.12
62 0.09
63 0.09
64 0.07
65 0.07
66 0.07
67 0.05
68 0.05
69 0.05
70 0.07
71 0.1
72 0.15
73 0.18
74 0.25
75 0.34
76 0.45
77 0.55
78 0.6
79 0.68
80 0.73
81 0.8
82 0.81
83 0.82
84 0.8
85 0.8
86 0.76
87 0.73
88 0.69
89 0.68
90 0.64
91 0.64
92 0.62
93 0.63
94 0.67
95 0.7
96 0.71
97 0.72
98 0.74