Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

Q6FP88

Protein Details
Accession Q6FP88    Localization Confidence Low Confidence Score 7.5
NoLS Segment(s)
PositionSequenceProtein Nature
11-30QNNNNRGQQKKKFEAPKREAHydrophilic
NLS Segment(s)
Subcellular Location(s) cyto_nucl 12.833, cyto 12.5, nucl 11, cyto_pero 7.666
Family & Domain DBs
InterPro View protein in InterPro  
IPR017132  Lsm7  
IPR044641  Lsm7/SmG-like  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:1990726  C:Lsm1-7-Pat1 complex  
GO:0005730  C:nucleolus  
GO:0000932  C:P-body  
GO:0005732  C:sno(s)RNA-containing ribonucleoprotein complex  
GO:0046540  C:U4/U6 x U5 tri-snRNP complex  
GO:0005682  C:U5 snRNP  
GO:0005688  C:U6 snRNP  
GO:0008266  F:poly(U) RNA binding  
GO:0030620  F:U2 snRNA binding  
GO:0000290  P:deadenylation-dependent decapping of nuclear-transcribed mRNA  
GO:0030490  P:maturation of SSU-rRNA  
GO:0000398  P:mRNA splicing, via spliceosome  
GO:0008033  P:tRNA processing  
KEGG cgr:CAGL0J05764g  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01729  LSm7  
Amino Acid Sequences MSEQNTQQAEQNNNNRGQQKKKFEAPKREAIVDLGKYKDSKVSVKLMGGRIVTGILKGYDQLMNLVLEETEETLKPEVETGATQQVTRQLGLTVIRGTILISLSPLDGSEVLYIQTN
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.56
2 0.58
3 0.58
4 0.61
5 0.62
6 0.63
7 0.64
8 0.69
9 0.74
10 0.78
11 0.82
12 0.79
13 0.79
14 0.73
15 0.67
16 0.59
17 0.51
18 0.46
19 0.39
20 0.35
21 0.26
22 0.24
23 0.23
24 0.23
25 0.23
26 0.2
27 0.2
28 0.2
29 0.23
30 0.23
31 0.25
32 0.29
33 0.27
34 0.27
35 0.24
36 0.2
37 0.16
38 0.15
39 0.13
40 0.08
41 0.07
42 0.05
43 0.05
44 0.05
45 0.06
46 0.06
47 0.06
48 0.06
49 0.07
50 0.06
51 0.06
52 0.06
53 0.05
54 0.04
55 0.05
56 0.05
57 0.05
58 0.05
59 0.06
60 0.07
61 0.07
62 0.07
63 0.08
64 0.07
65 0.07
66 0.08
67 0.08
68 0.14
69 0.14
70 0.14
71 0.14
72 0.19
73 0.2
74 0.19
75 0.18
76 0.13
77 0.14
78 0.16
79 0.17
80 0.12
81 0.11
82 0.11
83 0.1
84 0.1
85 0.1
86 0.09
87 0.07
88 0.07
89 0.07
90 0.07
91 0.08
92 0.07
93 0.08
94 0.07
95 0.08
96 0.09
97 0.09