Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

Q6FTD0

Protein Details
Accession Q6FTD0    Localization Confidence Medium Confidence Score 10.6
NoLS Segment(s)
PositionSequenceProtein Nature
134-159NNNNRRNYNNRRYYNNQNQNQNQNQSHydrophilic
NLS Segment(s)
Subcellular Location(s) nucl 15, cyto 6, mito 3, cyto_pero 3
Family & Domain DBs
InterPro View protein in InterPro  
IPR034101  Lsm4  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:1990726  C:Lsm1-7-Pat1 complex  
GO:0005730  C:nucleolus  
GO:0000932  C:P-body  
GO:0005732  C:sno(s)RNA-containing ribonucleoprotein complex  
GO:0005681  C:spliceosomal complex  
GO:0046540  C:U4/U6 x U5 tri-snRNP complex  
GO:0005688  C:U6 snRNP  
GO:0017070  F:U6 snRNA binding  
GO:0000290  P:deadenylation-dependent decapping of nuclear-transcribed mRNA  
GO:0000398  P:mRNA splicing, via spliceosome  
GO:0033962  P:P-body assembly  
GO:0006364  P:rRNA processing  
GO:0008033  P:tRNA processing  
KEGG cgr:CAGL0G03465g  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01723  LSm4  
Amino Acid Sequences MLPLYLLTNAKGQQMRIELKNGDIVEGELTNVDNWMNLTLANVNEYKGSENNTNLPQVKVVKSKEIYVRGVYIKYITLQDDIIEKVKQQINNNNNNNNNRKFNNRNHQNNYGYRRNNTGGNYNNGNNNNNNNNNNNNRRNYNNRRYYNNQNQNQNQNQSQGQSQGQKNQQFE
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.32
2 0.37
3 0.35
4 0.39
5 0.34
6 0.33
7 0.38
8 0.33
9 0.26
10 0.2
11 0.18
12 0.15
13 0.14
14 0.13
15 0.08
16 0.08
17 0.07
18 0.08
19 0.07
20 0.05
21 0.06
22 0.06
23 0.06
24 0.06
25 0.06
26 0.08
27 0.08
28 0.1
29 0.1
30 0.1
31 0.1
32 0.11
33 0.12
34 0.12
35 0.15
36 0.16
37 0.18
38 0.21
39 0.23
40 0.27
41 0.26
42 0.25
43 0.24
44 0.24
45 0.26
46 0.28
47 0.28
48 0.3
49 0.3
50 0.33
51 0.36
52 0.37
53 0.35
54 0.3
55 0.31
56 0.26
57 0.26
58 0.22
59 0.17
60 0.13
61 0.12
62 0.12
63 0.1
64 0.09
65 0.09
66 0.09
67 0.09
68 0.1
69 0.11
70 0.1
71 0.09
72 0.13
73 0.16
74 0.18
75 0.21
76 0.28
77 0.34
78 0.44
79 0.49
80 0.51
81 0.53
82 0.57
83 0.61
84 0.57
85 0.54
86 0.46
87 0.49
88 0.51
89 0.54
90 0.59
91 0.62
92 0.67
93 0.69
94 0.74
95 0.72
96 0.72
97 0.7
98 0.68
99 0.62
100 0.54
101 0.52
102 0.46
103 0.44
104 0.39
105 0.39
106 0.35
107 0.36
108 0.38
109 0.34
110 0.38
111 0.37
112 0.38
113 0.33
114 0.35
115 0.38
116 0.4
117 0.42
118 0.4
119 0.45
120 0.51
121 0.58
122 0.6
123 0.58
124 0.57
125 0.6
126 0.67
127 0.7
128 0.72
129 0.73
130 0.71
131 0.73
132 0.76
133 0.79
134 0.8
135 0.8
136 0.77
137 0.76
138 0.78
139 0.8
140 0.81
141 0.77
142 0.68
143 0.62
144 0.57
145 0.49
146 0.45
147 0.4
148 0.37
149 0.39
150 0.4
151 0.44
152 0.51