Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A0L6UB38

Protein Details
Accession A0A0L6UB38    Localization Confidence Medium Confidence Score 11.4
NoLS Segment(s)
PositionSequenceProtein Nature
78-99DDAPKPKKKKDGDARGRGRGRGBasic
NLS Segment(s)
PositionSequence
81-118PKPKKKKDGDARGRGRGRGIADRGGRSRGRGRGRTRGI
Subcellular Location(s) nucl 13, cyto_nucl 12.5, cyto 10, mito 3
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLIRLNQETVTIELKNGTVVHGTISGVDVAMNTHLKAVKMTVRNREPQQLDSLSIRGSNVRYIILPDSLPLDTLLIDDAPKPKKKKDGDARGRGRGRGIADRGGRSRGRGRGRTRGI
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.2
2 0.19
3 0.16
4 0.14
5 0.12
6 0.1
7 0.1
8 0.11
9 0.1
10 0.1
11 0.09
12 0.09
13 0.08
14 0.07
15 0.07
16 0.05
17 0.05
18 0.07
19 0.07
20 0.07
21 0.09
22 0.1
23 0.1
24 0.11
25 0.12
26 0.16
27 0.23
28 0.27
29 0.35
30 0.38
31 0.44
32 0.46
33 0.52
34 0.48
35 0.42
36 0.43
37 0.35
38 0.32
39 0.27
40 0.25
41 0.17
42 0.15
43 0.14
44 0.1
45 0.1
46 0.09
47 0.08
48 0.08
49 0.08
50 0.09
51 0.1
52 0.1
53 0.09
54 0.08
55 0.09
56 0.09
57 0.09
58 0.08
59 0.07
60 0.06
61 0.06
62 0.06
63 0.05
64 0.05
65 0.06
66 0.12
67 0.18
68 0.24
69 0.28
70 0.32
71 0.41
72 0.46
73 0.56
74 0.61
75 0.67
76 0.71
77 0.78
78 0.82
79 0.82
80 0.8
81 0.71
82 0.62
83 0.54
84 0.48
85 0.45
86 0.4
87 0.38
88 0.39
89 0.43
90 0.44
91 0.46
92 0.43
93 0.41
94 0.45
95 0.47
96 0.52
97 0.56
98 0.61