Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

W4JXP9

Protein Details
Accession W4JXP9    Localization Confidence Medium Confidence Score 12.3
NoLS Segment(s)
PositionSequenceProtein Nature
82-103DDAPKPKGRKKEDTRGRGRGGRBasic
NLS Segment(s)
PositionSequence
85-122PKPKGRKKEDTRGRGRGGRGGGDRGRSRGRGRGRGRGF
Subcellular Location(s) nucl 16.5, cyto_nucl 11.5, cyto 5.5, mito 5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
KEGG hir:HETIRDRAFT_441580  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLNNETVTIELKNGCVVHGTITGVDMQMNTHLKTVKMTARNRDPTSLDSLSIRGNNIRYFILPDSLPLDTLLVDDAPKPKGRKKEDTRGRGRGGRGGGDRGRSRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.25
3 0.19
4 0.18
5 0.16
6 0.14
7 0.16
8 0.16
9 0.14
10 0.12
11 0.11
12 0.12
13 0.13
14 0.13
15 0.1
16 0.1
17 0.11
18 0.09
19 0.09
20 0.07
21 0.06
22 0.1
23 0.12
24 0.12
25 0.13
26 0.14
27 0.14
28 0.16
29 0.19
30 0.21
31 0.27
32 0.31
33 0.37
34 0.45
35 0.52
36 0.53
37 0.52
38 0.47
39 0.41
40 0.44
41 0.36
42 0.28
43 0.2
44 0.2
45 0.19
46 0.17
47 0.15
48 0.1
49 0.11
50 0.11
51 0.12
52 0.12
53 0.11
54 0.13
55 0.13
56 0.13
57 0.11
58 0.11
59 0.12
60 0.12
61 0.12
62 0.09
63 0.09
64 0.07
65 0.07
66 0.07
67 0.05
68 0.05
69 0.06
70 0.09
71 0.11
72 0.16
73 0.19
74 0.24
75 0.34
76 0.41
77 0.51
78 0.57
79 0.66
80 0.72
81 0.8
82 0.83
83 0.82
84 0.8
85 0.75
86 0.68
87 0.63
88 0.55
89 0.51
90 0.44
91 0.44
92 0.4
93 0.43
94 0.43
95 0.43
96 0.46
97 0.45
98 0.46
99 0.47
100 0.54
101 0.56
102 0.61