Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

C1GRB7

Protein Details
Accession C1GRB7    Localization Confidence Medium Confidence Score 11.2
NoLS Segment(s)
PositionSequenceProtein Nature
75-95DDAPKPKNKARKETDRGRGRGBasic
NLS Segment(s)
PositionSequence
78-114PKPKNKARKETDRGRGRGGGRGRGGGRGRGRGRGRGF
Subcellular Location(s) nucl 14.5, cyto_nucl 11.333, cyto 7, cyto_mito 6.833, mito 5.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0003723  F:RNA binding  
GO:0000387  P:spliceosomal snRNP assembly  
GO:0008033  P:tRNA processing  
KEGG pbl:PAAG_01062  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKCANETVTIELKNGTILHGTITSVSPQMNTALRTVKMTTKGRDPISLDTINIRGSTIRYYILPDSLPLDTLLVDDAPKPKNKARKETDRGRGRGGGRGRGGGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.19
2 0.15
3 0.11
4 0.1
5 0.11
6 0.11
7 0.11
8 0.1
9 0.11
10 0.11
11 0.11
12 0.11
13 0.09
14 0.1
15 0.12
16 0.13
17 0.13
18 0.14
19 0.17
20 0.17
21 0.19
22 0.2
23 0.21
24 0.27
25 0.31
26 0.31
27 0.34
28 0.39
29 0.39
30 0.4
31 0.39
32 0.34
33 0.35
34 0.33
35 0.27
36 0.22
37 0.22
38 0.19
39 0.16
40 0.13
41 0.08
42 0.08
43 0.09
44 0.08
45 0.08
46 0.08
47 0.1
48 0.1
49 0.11
50 0.1
51 0.09
52 0.11
53 0.1
54 0.1
55 0.08
56 0.08
57 0.07
58 0.07
59 0.07
60 0.05
61 0.05
62 0.06
63 0.1
64 0.13
65 0.16
66 0.2
67 0.25
68 0.34
69 0.41
70 0.5
71 0.55
72 0.64
73 0.7
74 0.76
75 0.81
76 0.82
77 0.78
78 0.73
79 0.7
80 0.6
81 0.59
82 0.54
83 0.51
84 0.43
85 0.46
86 0.42
87 0.43
88 0.44
89 0.45
90 0.45
91 0.47
92 0.48
93 0.52
94 0.55