Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A5N5QKP0

Protein Details
Accession A0A5N5QKP0    Localization Confidence Medium Confidence Score 12
NoLS Segment(s)
PositionSequenceProtein Nature
75-95DDAPKPKGKKKEDARGRGRGRBasic
NLS Segment(s)
PositionSequence
78-113PKPKGKKKEDARGRGRGRGTDRGRGRGPRGGRPRGR
Subcellular Location(s) nucl 16.5, cyto_nucl 14, cyto 10.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLNNETVTVELKNGSVVHGTLTGVDVQMNTHLKNVKLTSRNRDPTALDTLSIRGNNIRYIILPDALNLDALLVDDAPKPKGKKKEDARGRGRGRGTDRGRGRGPRGGRPRGR
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.14
2 0.14
3 0.11
4 0.1
5 0.11
6 0.11
7 0.11
8 0.09
9 0.1
10 0.09
11 0.08
12 0.08
13 0.07
14 0.06
15 0.11
16 0.13
17 0.12
18 0.15
19 0.17
20 0.17
21 0.22
22 0.24
23 0.26
24 0.32
25 0.37
26 0.42
27 0.5
28 0.55
29 0.52
30 0.52
31 0.47
32 0.42
33 0.43
34 0.35
35 0.25
36 0.2
37 0.2
38 0.19
39 0.17
40 0.14
41 0.1
42 0.1
43 0.11
44 0.11
45 0.1
46 0.08
47 0.11
48 0.11
49 0.11
50 0.1
51 0.1
52 0.1
53 0.1
54 0.1
55 0.07
56 0.06
57 0.05
58 0.05
59 0.05
60 0.03
61 0.04
62 0.06
63 0.07
64 0.09
65 0.14
66 0.16
67 0.23
68 0.33
69 0.38
70 0.47
71 0.55
72 0.65
73 0.71
74 0.79
75 0.8
76 0.81
77 0.8
78 0.77
79 0.7
80 0.66
81 0.61
82 0.61
83 0.58
84 0.58
85 0.58
86 0.58
87 0.62
88 0.62
89 0.61
90 0.58
91 0.59
92 0.59
93 0.64