Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

C5MDA9

Protein Details
Accession C5MDA9    Localization Confidence High Confidence Score 23.2
NoLS Segment(s)
PositionSequenceProtein Nature
15-39ETPTTAKLSKKERKALQFRKSKDERHydrophilic
71-98TDESSDQPKKKRKTRRGKKGKGVNGGKGBasic
193-213EKVYEERKKRVQDSKSKSKSSHydrophilic
NLS Segment(s)
PositionSequence
23-52SKKERKALQFRKSKDERDAEKEEKLQKKRK
78-99PKKKRKTRRGKKGKGVNGGKGP
199-202RKKR
Subcellular Location(s) nucl 24, cyto_nucl 15
Family & Domain DBs
InterPro View protein in InterPro  
IPR034228  Nop6_RRM  
IPR012677  Nucleotide-bd_a/b_plait_sf  
IPR035979  RBD_domain_sf  
IPR000504  RRM_dom  
Gene Ontology GO:0030686  C:90S preribosome  
GO:0005730  C:nucleolus  
GO:0032040  C:small-subunit processome  
GO:0019843  F:rRNA binding  
GO:0030515  F:snoRNA binding  
GO:0042274  P:ribosomal small subunit biogenesis  
KEGG ctp:CTRG_04210  -  
Pfam View protein in Pfam  
PF00076  RRM_1  
PROSITE View protein in PROSITE  
PS50102  RRM  
CDD cd12400  RRM_Nop6  
Amino Acid Sequences MSEPTSTTKTTAITETPTTAKLSKKERKALQFRKSKDERDAEKEEKLQKKRKLEEEQEQSSSSSSSATNTTDESSDQPKKKRKTRRGKKGKGVNGGKGPRFILFVGNLPYDIKQVELISHFKNSNPDRIRIRQDKGIAFLEFDNENQEIQSKMELALRMHHSELRGRKINVELTVGGGGNSENRLAKLKEKNEKVYEERKKRVQDSKSKSKSSTTSKSTPPPNVHPSRAALFK
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.24
2 0.26
3 0.26
4 0.26
5 0.27
6 0.27
7 0.3
8 0.33
9 0.41
10 0.47
11 0.54
12 0.63
13 0.68
14 0.75
15 0.81
16 0.85
17 0.84
18 0.84
19 0.8
20 0.81
21 0.79
22 0.74
23 0.72
24 0.71
25 0.67
26 0.66
27 0.7
28 0.63
29 0.6
30 0.61
31 0.61
32 0.61
33 0.63
34 0.65
35 0.64
36 0.7
37 0.74
38 0.77
39 0.78
40 0.77
41 0.78
42 0.77
43 0.75
44 0.68
45 0.61
46 0.51
47 0.42
48 0.34
49 0.24
50 0.16
51 0.11
52 0.09
53 0.1
54 0.11
55 0.11
56 0.12
57 0.13
58 0.12
59 0.13
60 0.14
61 0.2
62 0.27
63 0.31
64 0.38
65 0.47
66 0.55
67 0.63
68 0.72
69 0.76
70 0.79
71 0.85
72 0.89
73 0.91
74 0.92
75 0.93
76 0.92
77 0.89
78 0.87
79 0.81
80 0.74
81 0.71
82 0.66
83 0.57
84 0.49
85 0.41
86 0.31
87 0.28
88 0.23
89 0.16
90 0.12
91 0.13
92 0.13
93 0.13
94 0.12
95 0.11
96 0.11
97 0.1
98 0.09
99 0.08
100 0.06
101 0.06
102 0.07
103 0.08
104 0.11
105 0.11
106 0.14
107 0.14
108 0.14
109 0.22
110 0.22
111 0.29
112 0.29
113 0.33
114 0.36
115 0.41
116 0.49
117 0.47
118 0.49
119 0.45
120 0.47
121 0.43
122 0.41
123 0.38
124 0.3
125 0.25
126 0.22
127 0.19
128 0.15
129 0.14
130 0.13
131 0.1
132 0.1
133 0.09
134 0.1
135 0.08
136 0.09
137 0.09
138 0.07
139 0.08
140 0.1
141 0.12
142 0.12
143 0.16
144 0.19
145 0.21
146 0.21
147 0.22
148 0.21
149 0.26
150 0.31
151 0.33
152 0.36
153 0.35
154 0.36
155 0.39
156 0.41
157 0.36
158 0.33
159 0.26
160 0.21
161 0.21
162 0.19
163 0.15
164 0.11
165 0.09
166 0.08
167 0.09
168 0.09
169 0.08
170 0.09
171 0.14
172 0.15
173 0.23
174 0.31
175 0.39
176 0.47
177 0.53
178 0.61
179 0.62
180 0.67
181 0.66
182 0.68
183 0.7
184 0.7
185 0.71
186 0.71
187 0.74
188 0.76
189 0.78
190 0.77
191 0.77
192 0.77
193 0.8
194 0.82
195 0.79
196 0.73
197 0.71
198 0.69
199 0.68
200 0.68
201 0.64
202 0.62
203 0.63
204 0.7
205 0.71
206 0.71
207 0.69
208 0.68
209 0.71
210 0.71
211 0.69
212 0.64
213 0.61