Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

C5M734

Protein Details
Accession C5M734    Localization Confidence Medium Confidence Score 10.3
NoLS Segment(s)
PositionSequenceProtein Nature
79-98IKNNKGKKIKSVPKERFISKHydrophilic
NLS Segment(s)
Subcellular Location(s) nucl 19.5, cyto_nucl 12.5, cyto 4.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR027248  Sm_D2  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005829  C:cytosol  
GO:0071014  C:post-mRNA release spliceosomal complex  
GO:0000974  C:Prp19 complex  
GO:0005685  C:U1 snRNP  
GO:0005686  C:U2 snRNP  
GO:0071004  C:U2-type prespliceosome  
GO:0005687  C:U4 snRNP  
GO:0046540  C:U4/U6 x U5 tri-snRNP complex  
GO:0005682  C:U5 snRNP  
GO:0036261  P:7-methylguanosine cap hypermethylation  
GO:0000398  P:mRNA splicing, via spliceosome  
KEGG ctp:CTRG_01666  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01720  Sm_D2  
Amino Acid Sequences MSELIDRPRSELTELELKALEEYEFNHGPMSILNNAVKNNTPIIISCRNNHKLIGKVRAFDRHCNLVLENVKDLWSEDIKNNKGKKIKSVPKERFISKLFLRGDSVIIILKA
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.29
2 0.28
3 0.26
4 0.24
5 0.22
6 0.22
7 0.17
8 0.09
9 0.1
10 0.15
11 0.15
12 0.15
13 0.14
14 0.14
15 0.14
16 0.14
17 0.16
18 0.11
19 0.13
20 0.14
21 0.15
22 0.16
23 0.17
24 0.17
25 0.15
26 0.15
27 0.13
28 0.11
29 0.1
30 0.15
31 0.22
32 0.23
33 0.25
34 0.32
35 0.35
36 0.36
37 0.37
38 0.35
39 0.34
40 0.37
41 0.43
42 0.35
43 0.34
44 0.34
45 0.41
46 0.4
47 0.38
48 0.37
49 0.32
50 0.32
51 0.31
52 0.29
53 0.27
54 0.28
55 0.25
56 0.22
57 0.18
58 0.18
59 0.17
60 0.17
61 0.13
62 0.12
63 0.12
64 0.16
65 0.24
66 0.27
67 0.35
68 0.37
69 0.41
70 0.46
71 0.46
72 0.52
73 0.54
74 0.6
75 0.63
76 0.71
77 0.73
78 0.76
79 0.81
80 0.73
81 0.69
82 0.63
83 0.6
84 0.52
85 0.52
86 0.44
87 0.4
88 0.4
89 0.34
90 0.33
91 0.25
92 0.24