Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A4S2MTD2

Protein Details
Accession A0A4S2MTD2    Localization Confidence Medium Confidence Score 10.8
NoLS Segment(s)
PositionSequenceProtein Nature
100-124EKAAEERKEKIYRKKLRRLGFEDEGBasic
NLS Segment(s)
PositionSequence
99-117REKAAEERKEKIYRKKLRR
Subcellular Location(s) cyto_nucl 12.333, nucl 12, cyto 11.5, mito_nucl 7.333
Family & Domain DBs
InterPro View protein in InterPro  
IPR034104  Lsm1  
IPR010920  LSM_dom_sf  
IPR044642  PTHR15588  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0000932  C:P-body  
GO:1990904  C:ribonucleoprotein complex  
GO:0000339  F:RNA cap binding  
GO:0006397  P:mRNA processing  
GO:0000956  P:nuclear-transcribed mRNA catabolic process  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01728  LSm1  
Amino Acid Sequences MFTTSAQLIDLTDKKLMIALRDGRKLIGVLRAWDQVSNLVLQSTVERLYCNGMYCDIPRGVFIVRGENVLLLGEIDLDREDEIPLRQASVQEVFAEQRREKAAEERKEKIYRKKLRRLGFEDEGEPLH
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.17
2 0.2
3 0.2
4 0.16
5 0.21
6 0.27
7 0.32
8 0.36
9 0.37
10 0.34
11 0.34
12 0.33
13 0.27
14 0.26
15 0.2
16 0.19
17 0.21
18 0.23
19 0.23
20 0.23
21 0.21
22 0.16
23 0.15
24 0.13
25 0.11
26 0.08
27 0.07
28 0.07
29 0.07
30 0.07
31 0.07
32 0.07
33 0.07
34 0.08
35 0.11
36 0.11
37 0.12
38 0.11
39 0.11
40 0.12
41 0.12
42 0.15
43 0.12
44 0.11
45 0.1
46 0.11
47 0.1
48 0.11
49 0.11
50 0.11
51 0.11
52 0.11
53 0.11
54 0.1
55 0.1
56 0.07
57 0.07
58 0.04
59 0.03
60 0.03
61 0.03
62 0.03
63 0.03
64 0.04
65 0.04
66 0.05
67 0.05
68 0.06
69 0.06
70 0.09
71 0.09
72 0.1
73 0.1
74 0.1
75 0.12
76 0.13
77 0.14
78 0.11
79 0.12
80 0.13
81 0.16
82 0.22
83 0.2
84 0.21
85 0.23
86 0.24
87 0.25
88 0.33
89 0.39
90 0.43
91 0.49
92 0.51
93 0.57
94 0.64
95 0.7
96 0.71
97 0.72
98 0.73
99 0.77
100 0.83
101 0.84
102 0.84
103 0.87
104 0.83
105 0.81
106 0.77
107 0.71
108 0.61